RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TATDN3Q17R31 274 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 GGNBP1Q5YKI7 109 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 MITD1Q8WV92 249 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 BSCL2Q96G97 398 aaPredicted RBP7.33□□□□□ -1.24
SRP54-210ENST00000556380 OR4C12Q96R67 309 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 TXN2Q99757 166 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 ELOVL1Q9BW60 279 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 ZNF436Q9C0F3 470 aaPredicted RBP7.33□□□□□ -1.24
SRP54-210ENST00000556380 FNDC4Q9H6D8 234 aaPredicted RBP7.33□□□□□ -1.24
SRP54-210ENST00000556380 ZMAT5Q9UDW3 170 aaKnown RBP7.33□□□□□ -1.24
SRP54-210ENST00000556380 TRAV6A0A075B6T7 132 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 FAM240BA0A1B0GVZ2 78 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 TMEM213A2RRL7 107 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 OR2T8A6NH00 312 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 CEBPZOSA8MTT3 80 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 MPTX1A8MV57 137 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 FAM90A26D6RGX4 464 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 ADAP1O75689 374 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 NXPH3O95157 252 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 IGHV3-48P01763 117 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 SUB1P53999 127 aaKnown RBP eCLIP7.32□□□□□ -1.24
SRP54-210ENST00000556380 MFAP4P55083 255 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 MLANAQ16655 118 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 C4orf46Q504U0 113 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 C2orf83Q53S99 150 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 SPSB3Q6PJ21 355 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 PLET1Q6UQ28 207 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 UNQ9165/PRO28630Q6UXU0 137 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 DUSP18Q8NEJ0 188 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 OR52B4Q8NGK2 314 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 RBKSQ9H477 322 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 ENY2Q9NPA8 101 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 HEYLQ9NQ87 328 aaPredicted RBP7.32□□□□□ -1.24
SRP54-210ENST00000556380 ZC4H2Q9NQZ6 224 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 NUDT15Q9NV35 164 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 MRPL36Q9P0J6 103 aaKnown RBP7.32□□□□□ -1.24
SRP54-210ENST00000556380 U3KQE9 123 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 COL7A1Q02388 2944 aa7.32□□□□□ -1.24
SRP54-210ENST00000556380 C2orf70A6NJV1 201 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 A8MWP6 167 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 CORTO00230 105 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 LY86O95711 162 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 C8orf88P0DMB2 117 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 EDN2P20800 178 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 ATP5IP56385 69 aaPredicted RBP7.31□□□□□ -1.24
SRP54-210ENST00000556380 DEFA1P59665 94 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 DEFA3P59666 94 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 FAM106AQ4KMX7 169 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 HAPLN4Q86UW8 402 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 SLC24A4Q8NFF2 622 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 OR1S1Q8NH92 325 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 COQ8AQ8NI60 647 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 RNASEH2CQ8TDP1 164 aaKnown RBP7.31□□□□□ -1.24
SRP54-210ENST00000556380 PEMTQ9UBM1 199 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 U3KQ87 197 aa7.31□□□□□ -1.24
SRP54-210ENST00000556380 IGHV3-35A0A0C4DH35 117 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 TMEM50AO95807 157 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 IL5P05113 134 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 FOLR2P14207 255 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 SPNP16150 400 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 CBLN1P23435 193 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 ELLP55199 621 aaPredicted RBP7.3□□□□□ -1.24
SRP54-210ENST00000556380 DEFB114Q30KQ6 69 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 TM4SF20Q53R12 229 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 Q56UQ5 140 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 NRARPQ7Z6K4 114 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 OR4D5Q8NGN0 318 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 OR4X1Q8NH49 305 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 DTD1Q8TEA8 209 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 ZNF431Q8TF32 576 aaPredicted RBP7.3□□□□□ -1.24
SRP54-210ENST00000556380 TMEM190Q8WZ59 177 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 PINX1Q96BK5 328 aaKnown RBP7.3□□□□□ -1.24
SRP54-210ENST00000556380 OR10C1Q96KK4 312 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 PRR25Q96S07 402 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 SEC22CQ9BRL7 303 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 HIPK2Q9H2X6 1198 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 GAR1Q9NY12 217 aaKnown RBP7.3□□□□□ -1.24
SRP54-210ENST00000556380 ZNF256Q9Y2P7 627 aaPredicted RBP7.3□□□□□ -1.24
SRP54-210ENST00000556380 LSM4Q9Y4Z0 139 aaKnown RBP7.3□□□□□ -1.24
SRP54-210ENST00000556380 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
SRP54-210ENST00000556380 ZNF320A2RRD8 509 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 IZUMO1RA6ND01 250 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 K7EMT4 169 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 NDUFA4O00483 81 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 NPY1RP25929 384 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 NPBWR1P48145 328 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 PRSS54Q6PEW0 395 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 NOXA1Q86UR1 476 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 UBAC2Q8NBM4 344 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 TMEM116Q8NCL8 245 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 ENKURQ8TC29 256 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 MRAPQ8TCY5 172 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 CACNG8Q8WXS5 425 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 MARVELD1Q9BSK0 173 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 MAGT1Q9H0U3 335 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 NBEAL2Q6ZNJ1 2754 aa7.29□□□□□ -1.24
SRP54-210ENST00000556380 C15orf62A8K5M9 175 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 ZNF785A8K8V0 405 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 NUPL2O15504 423 aaKnown RBP7.28□□□□□ -1.24
SRP54-210ENST00000556380 SYNGR2O43760 224 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms