RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CRISP1P54107 249 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CTBP2P56545 445 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 RPL31P62899 125 aaKnown RBP2.96□□□□□ -1.94
PRPF39-209ENST00000556353 RPL8P62917 257 aaKnown RBP2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CDK6Q00534 326 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CLEC12BQ2HXU8 276 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CYBRD1Q53TN4 286 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 TEX36Q5VZQ5 186 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 FAM19A1Q7Z5A9 133 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 SLC35F2Q8IXU6 374 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CMTM1Q8IZ96 169 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 GATD1Q8NB37 220 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 MCFD2Q8NI22 146 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 DEDD2Q8WXF8 326 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 ARL11Q969Q4 196 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 APOBEC3DQ96AK3 386 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-209ENST00000556353 PPCDCQ96CD2 204 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 SLC35E1Q96K37 410 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 TEX37Q96LM6 180 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CNBD2Q96M20 576 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 GPR82Q96P67 336 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 SORT1Q99523 831 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 REG4Q9BYZ8 158 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 LINC00470Q9BZP3 86 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 C20orf27Q9GZN8 174 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 UBQLN4Q9NRR5 601 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 FAM206AQ9NX38 181 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 DOK5Q9P104 306 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 TRAPPC2LQ9UL33 140 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 WSB1Q9Y6I7 421 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 U3KQ87 197 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CSMD3Q7Z407 3707 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 A0A1B0GX51 115 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 TMEM189A5PLL7 270 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 FABP7O15540 132 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 PPIHO43447 177 aaKnown RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 OR7C2O60412 319 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 CDS2O95674 445 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 HBZP02008 142 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 APOA2P02652 100 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 UCHL1P09936 223 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 IGFBP3P17936 291 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 RPS4Y1P22090 263 aaKnown RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 CRHBPP24387 322 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 S100A2P29034 98 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 APLNRP35414 380 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 OR1E2P47887 323 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 P2RX1P51575 399 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 AQP5P55064 265 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 RHOGP84095 191 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 PSG4Q00888 419 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 TGFBR3Q03167 851 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 RHEBQ15382 184 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF141Q15928 474 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 SCGB2B2Q4G0G5 96 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 MORN2Q502X0 79 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 C1orf194Q5T5A4 169 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 TNFAIP8L2Q6P589 184 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 LEG1Q6P5S2 330 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 C10orf111Q8N326 155 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 MS4A15Q8N5U1 240 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 ZIC4Q8N9L1 334 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 WDR31Q8NA23 367 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 OR5A1Q8NGJ0 315 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 OR4C13Q8NGP0 309 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 OR5W2Q8NH69 310 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 SLC7A6Q92536 515 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 HIST1H2BAQ96A08 127 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF488Q96MN9 340 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 OXGR1Q96P68 337 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 SDF2Q99470 211 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 GPER1Q99527 375 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 NIPSNAP3BQ9BS92 247 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 RTBDNQ9BSG5 229 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 PSMG3Q9BT73 122 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 CHIAQ9BZP6 476 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 PPDPFQ9H3Y8 114 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 ENY2Q9NPA8 101 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 MEPEQ9NQ76 525 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 SAR1AQ9NR31 198 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 MRPL16Q9NX20 251 aaKnown RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 SIGLEC8Q9NYZ4 499 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF230Q9UIE0 474 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-209ENST00000556353 ERG28Q9UKR5 140 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 FZR1Q9UM11 496 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 SLC25A15Q9Y619 301 aa2.95□□□□□ -1.94
PRPF39-209ENST00000556353 DSPPQ9NZW4 1301 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 IGKV2D-24A0A075B6R9 120 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 TRAV38-1A0A0B4J264 116 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 PNMA8CA0A1B0GUJ8 204 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 A0A1B0GW55 424 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 A0A1W2PP18 115 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 CIB4A0PJX0 185 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 OR4C46A6NHA9 309 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 IFITM5A6NNB3 132 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 F5H5K5 113 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 TNFRSF11BO00300 401 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 HMGN4O00479 90 aa2.94□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF593O00488 134 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-209ENST00000556353 HMGB3O15347 200 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms