RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 MLANAQ16655 118 aa15.43■□□□□ 0.06
RCCD1-205ENST00000556333 PVRIGQ6DKI7 326 aa15.43■□□□□ 0.06
RCCD1-205ENST00000556333 GPHB5Q86YW7 130 aa15.43■□□□□ 0.06
RCCD1-205ENST00000556333 ZBTB8BQ8NAP8 495 aaPredicted RBP15.43■□□□□ 0.06
RCCD1-205ENST00000556333 ATP6V0BQ99437 205 aa15.43■□□□□ 0.06
RCCD1-205ENST00000556333 F8W735 103 aaPredicted RBP15.42■□□□□ 0.06
RCCD1-205ENST00000556333 POLR2GP62487 172 aaKnown RBP eCLIP15.42■□□□□ 0.06
RCCD1-205ENST00000556333 RAB11AP62491 216 aa15.42■□□□□ 0.06
RCCD1-205ENST00000556333 RPP30P78346 268 aaKnown RBP15.42■□□□□ 0.06
RCCD1-205ENST00000556333 ID3Q02535 119 aa15.42■□□□□ 0.06
RCCD1-205ENST00000556333 GSG1LQ6UXU4 331 aa15.42■□□□□ 0.06
RCCD1-205ENST00000556333 RNASEH2CQ8TDP1 164 aaKnown RBP15.42■□□□□ 0.06
RCCD1-205ENST00000556333 CHRDL1Q9BU40 450 aa15.42■□□□□ 0.06
RCCD1-205ENST00000556333 FNDC4Q9H6D8 234 aaPredicted RBP15.42■□□□□ 0.06
RCCD1-205ENST00000556333 PALMDQ9NP74 551 aa15.42■□□□□ 0.06
RCCD1-205ENST00000556333 SNRPGP15A8MWD9 76 aa15.41■□□□□ 0.06
RCCD1-205ENST00000556333 SSSCA1O60232 199 aa15.41■□□□□ 0.06
RCCD1-205ENST00000556333 PTTG1O95997 202 aa15.41■□□□□ 0.06
RCCD1-205ENST00000556333 PRB2P02812 416 aaPredicted RBP15.41■□□□□ 0.06
RCCD1-205ENST00000556333 KPRPQ5T749 579 aaPredicted RBP15.41■□□□□ 0.06
RCCD1-205ENST00000556333 ETFRF1Q6IPR1 90 aa15.41■□□□□ 0.06
RCCD1-205ENST00000556333 TMEM170AQ8WVE7 144 aa15.41■□□□□ 0.06
RCCD1-205ENST00000556333 LGALS9O00182 355 aa15.4■□□□□ 0.06
RCCD1-205ENST00000556333 SCGB2A1O75556 95 aa15.4■□□□□ 0.06
RCCD1-205ENST00000556333 ATP5IP56385 69 aaPredicted RBP15.4■□□□□ 0.06
RCCD1-205ENST00000556333 RELQ04864 619 aaPredicted RBP15.4■□□□□ 0.06
RCCD1-205ENST00000556333 SPANXN5Q5MJ07 72 aa15.4■□□□□ 0.06
RCCD1-205ENST00000556333 REC114Q7Z4M0 266 aa15.4■□□□□ 0.06
RCCD1-205ENST00000556333 C2orf50Q96LR7 162 aa15.4■□□□□ 0.06
RCCD1-205ENST00000556333 ZMAT5Q9UDW3 170 aaKnown RBP15.4■□□□□ 0.06
RCCD1-205ENST00000556333 H3BP45 60 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 LY86O95711 162 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 CTSGP08311 255 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 FCGR2BP31994 310 aaPredicted RBP15.39■□□□□ 0.05
RCCD1-205ENST00000556333 ADMP35318 185 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 KRTAP10-11P60412 298 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 HAPLN4Q86UW8 402 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 C20orf24Q9BUV8 137 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 ZNF436Q9C0F3 470 aaPredicted RBP15.39■□□□□ 0.05
RCCD1-205ENST00000556333 PSENENQ9NZ42 101 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 LSM5Q9Y4Y9 91 aaKnown RBP15.39■□□□□ 0.05
RCCD1-205ENST00000556333 NOTCH1P46531 2555 aa15.39■□□□□ 0.05
RCCD1-205ENST00000556333 C15orf62A8K5M9 175 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 GOSR2O14653 212 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 SSNA1O43805 119 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 CSN3P07498 182 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 SLC25A4P12235 298 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 EGFEM1PQ0D2K5 195 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 DCTN2Q13561 401 aaKnown RBP15.38■□□□□ 0.05
RCCD1-205ENST00000556333 UNQ9165/PRO28630Q6UXU0 137 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 OR4X1Q8NH49 305 aa15.38■□□□□ 0.05
RCCD1-205ENST00000556333 MRPL36Q9P0J6 103 aaKnown RBP15.38■□□□□ 0.05
RCCD1-205ENST00000556333 STRAPQ9Y3F4 350 aaKnown RBP15.38■□□□□ 0.05
RCCD1-205ENST00000556333 NOTCH3Q9UM47 2321 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 IGHV3OR16-8A0A075B7F1 116 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 C2orf70A6NJV1 201 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 NDUFA4O00483 81 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 CLN5O75503 358 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 YIF1AO95070 293 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 TMEM50AO95807 157 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 MBPP02686 304 aaPredicted RBP15.37■□□□□ 0.05
RCCD1-205ENST00000556333 RND2P52198 227 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 CD69Q07108 199 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 IL34Q6ZMJ4 242 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 SLC16A13Q7RTY0 426 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 DYNLRB2Q8TF09 96 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 ACY3Q96HD9 319 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 RCL1Q9Y2P8 373 aaKnown RBP15.37■□□□□ 0.05
RCCD1-205ENST00000556333 UFC1Q9Y3C8 167 aa15.37■□□□□ 0.05
RCCD1-205ENST00000556333 TRAV30A0A087WSZ9 112 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 L7N2F9 121 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 EDN2P20800 178 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 S100A10P60903 97 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 VAMP2P63027 116 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 TM4SF20Q53R12 229 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 PRSS54Q6PEW0 395 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 RAB40CQ96S21 281 aa15.36■□□□□ 0.05
RCCD1-205ENST00000556333 AURKAIP1Q9NWT8 199 aaPredicted RBP15.36■□□□□ 0.05
RCCD1-205ENST00000556333 A8MWP6 167 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 SIX6O95475 246 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 FOLR2P14207 255 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 RGS21Q2M5E4 152 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 CACNG8Q8WXS5 425 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 TMEM190Q8WZ59 177 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 NPIPB3Q92617 1050 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 SLC35E1Q96K37 410 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 SMIM8Q96KF7 97 aa15.35■□□□□ 0.05
RCCD1-205ENST00000556333 TMEM213A2RRL7 107 aa15.34■□□□□ 0.05
RCCD1-205ENST00000556333 K7EPK0 472 aa15.34■□□□□ 0.05
RCCD1-205ENST00000556333 ZNF207O43670 478 aaKnown RBP15.34■□□□□ 0.05
RCCD1-205ENST00000556333 IGLV1-51P01701 117 aa15.34■□□□□ 0.05
RCCD1-205ENST00000556333 CBLN1P23435 193 aa15.34■□□□□ 0.05
RCCD1-205ENST00000556333 GPX4P36969 197 aaPredicted RBP15.34■□□□□ 0.05
RCCD1-205ENST00000556333 ZNF600Q6ZNG1 722 aa15.34■□□□□ 0.05
RCCD1-205ENST00000556333 SIGLEC8Q9NYZ4 499 aa15.34■□□□□ 0.05
RCCD1-205ENST00000556333 ZNF256Q9Y2P7 627 aaPredicted RBP15.34■□□□□ 0.05
RCCD1-205ENST00000556333 OR10J1P30954 320 aa15.33■□□□□ 0.04
RCCD1-205ENST00000556333 ELLP55199 621 aaPredicted RBP15.33■□□□□ 0.04
RCCD1-205ENST00000556333 TIGITQ495A1 244 aa15.33■□□□□ 0.04
RCCD1-205ENST00000556333 TMEM116Q8NCL8 245 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms