RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 DHFRP00374 187 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 GIG44P09565 113 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-236ENST00000556220 HIST1H1BP16401 226 aaKnown RBP4.89□□□□□ -1.63
ATXN3-236ENST00000556220 HIST1H1DP16402 221 aaKnown RBP4.89□□□□□ -1.63
ATXN3-236ENST00000556220 HLA-DRB3P79483 266 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 IL18Q14116 193 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 CDK10Q15131 360 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 PYDC2Q56P42 97 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 SPATA12Q7Z6I5 190 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 GDPD1Q8N9F7 314 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 OR4C16Q8NGL9 310 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 OR10R2Q8NGX6 335 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 OSR1Q8TAX0 266 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-236ENST00000556220 ZNF502Q8TBZ5 544 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 S100ZQ8WXG8 99 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 RAB24Q969Q5 203 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 CXorf58Q96LI9 332 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 CMTM3Q96MX0 182 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 HRASLSQ9HDD0 168 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 RDH8Q9NYR8 311 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 CKLFQ9UBR5 152 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 GHRLQ9UBU3 117 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 MTFP1Q9UDX5 166 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 MGAT4AQ9UM21 535 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 CELA1Q9UNI1 258 aa4.89□□□□□ -1.63
ATXN3-236ENST00000556220 IGLV11-55A0A075B6I3 123 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 GABARAPH6UMI1 98 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 K7EMT4 169 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 SAA1P0DJI8 122 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-236ENST00000556220 DEFA4P12838 97 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 NPY1RP25929 384 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 PTBP1P26599 531 aaKnown RBP eCLIP4.88□□□□□ -1.634e-18■■■■■ 40.6
ATXN3-236ENST00000556220 GPR183P32249 361 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 TFPI2P48307 235 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 CDNFQ49AH0 187 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM41BQ5BJD5 291 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 ZNF767PQ75MW2 155 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 SSX9Q7RTT3 188 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 CROCCP3Q8IVE0 287 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 Q8N9P0 234 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM230Q96A57 120 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 FAM210BQ96KR6 192 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 RNF2Q99496 336 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 ATG5Q9H1Y0 275 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 Q9N2K0 584 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 AK3Q9UIJ7 227 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 RAB22AQ9UL26 194 aa4.88□□□□□ -1.63
ATXN3-236ENST00000556220 MRPS7Q9Y2R9 242 aaKnown RBP4.88□□□□□ -1.63
ATXN3-236ENST00000556220 A0A1B0GW64 132 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 NDUFA4O00483 81 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 LYRM1O43325 122 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 TGOLN2O43493 480 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 CD3DP04234 171 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 AREGP15514 252 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 DUTP33316 252 aaKnown RBP4.87□□□□□ -1.63
ATXN3-236ENST00000556220 RPL27AP46776 148 aaKnown RBP4.87□□□□□ -1.63
ATXN3-236ENST00000556220 SPANXN2Q5MJ10 180 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM69Q5SWH9 247 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 MZT2AQ6P582 158 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 C6orf223Q8N319 242 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 DUSP18Q8NEJ0 188 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 AP3S1Q92572 193 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 ADTRPQ96IZ2 230 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 C18orf15Q96N68 181 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM59Q9BXS4 323 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 OR2D2Q9H210 308 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 PLEKHJ1Q9NW61 149 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 SMPXQ9UHP9 88 aa4.87□□□□□ -1.63
ATXN3-236ENST00000556220 IGKV3-7A0A075B6H7 116 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 C7orf66A4D0T2 115 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 LINC00473A8K010 186 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 C15orf62A8K5M9 175 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 TRDCB7Z8K6 153 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 BOLA2-SMG1P6H3BVE0 249 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 CHEK1O14757 476 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 ZNF207O43670 478 aaKnown RBP4.86□□□□□ -1.63
ATXN3-236ENST00000556220 MALP21145 153 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 S100A5P33763 92 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 MAS1LP35410 378 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 FAM3BP58499 235 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-236ENST00000556220 PAFAH1B2P68402 229 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 Q5BKY6 102 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 AADACL3Q5VUY0 350 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 HACD4Q5VWC8 232 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 FAM90A2PQ658T7 463 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 LEMD1Q68G75 181 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 MORN3Q6PF18 240 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-236ENST00000556220 LHFPL1Q86WI0 220 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 STHQ8IWL8 128 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 LYPD1Q8N2G4 141 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 GBGT1Q8N5D6 347 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 ST6GAL2Q96JF0 529 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 OR2A7Q96R45 310 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 SEC22CQ9BRL7 303 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 MARVELD1Q9BSK0 173 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 C20orf24Q9BUV8 137 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 RHPN1-AS1Q9BWJ2 59 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 FXYD6Q9H0Q3 95 aa4.86□□□□□ -1.63
ATXN3-236ENST00000556220 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms