RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 S100GP29377 79 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 TNFSF8P32971 234 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 AKR1C2P52895 323 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 TAS2R19P59542 299 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 BSXQ3C1V8 233 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 AARDQ4LEZ3 155 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 STEAP1BQ6NZ63 245 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 LILRB2Q8N423 598 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 OR4C16Q8NGL9 310 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 TERB2Q8NHR7 220 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 SMPXQ9UHP9 88 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 PAIP2BQ9ULR5 123 aaKnown RBP6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 FAT2Q9NYQ8 4349 aa6.88□□□□□ -1.31
VIPAS39-207ENST00000555854 hCG_2014768A0A024R1R8 64 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 A0A1B0GU03 582 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 RAB3DO95716 219 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 APOHP02749 345 aaPredicted RBP6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 OR5AC1P0C628 307 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 MFAP4P55083 255 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 RELQ04864 619 aaPredicted RBP6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 DEFB135Q30KP9 77 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 ANKRD55Q3KP44 614 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 SCGB2B2Q4G0G5 96 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 TOMM20LQ6UXN7 152 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 ZBTB8BQ8NAP8 495 aaPredicted RBP6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 TMEM170AQ8WVE7 144 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 TMEM230Q96A57 120 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 RHPN1-AS1Q9BWJ2 59 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 DNAH17Q9UFH2 4485 aa6.87□□□□□ -1.31
VIPAS39-207ENST00000555854 CTDSPLO15194 276 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 NUPL2O15504 423 aaKnown RBP6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 RGS5O15539 181 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 SSBP1Q04837 148 aaKnown RBP6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 MLANAQ16655 118 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 WFDC3Q8IUB2 231 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 FAM24BQ8N5W8 94 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 SLC35G3Q8N808 338 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 CCDC71LQ8N9Z2 235 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 TMEM116Q8NCL8 245 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 GLYATL2Q8WU03 294 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 ST8SIA2Q92186 375 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 TXN2Q99757 166 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 TMEM222Q9H0R3 208 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 VSIRQ9H7M9 311 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 NAA60Q9H7X0 242 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 MAP6D1Q9H9H5 199 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 PRR13Q9NZ81 148 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 COPZ2Q9P299 210 aa6.86□□□□□ -1.31
VIPAS39-207ENST00000555854 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 IGHV3-66A0A0C4DH42 116 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 FABP12A6NFH5 140 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 OR4C46A6NHA9 309 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 CRYM-AS1A6NIL9 109 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 GNG7O60262 68 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 YIF1AO95070 293 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 CDS2O95674 445 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 IFNA17P01571 189 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 IGKV1-17P01599 117 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 RPL35AP18077 110 aaKnown RBP6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 TFPI2P48307 235 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 HOXA1P49639 335 aaPredicted RBP6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 MRPS10P82664 201 aaKnown RBP6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 ERHP84090 104 aaKnown RBP6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 IFITM3Q01628 133 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 ASAH1Q13510 395 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 MEF2DQ14814 521 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 LAMTOR1Q6IAA8 161 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 MZT2BQ6NZ67 158 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 SELENOHQ8IZQ5 122 aaKnown RBP6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 IL17DQ8TAD2 202 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 ZFAND1Q8TCF1 268 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 C15orf40Q8WUR7 153 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 GPR146Q96CH1 333 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 DIRAS2Q96HU8 199 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 SOSTQ9BQB4 213 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 GPR132Q9UNW8 380 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 TP53TG1Q9Y2A0 90 aa6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 PUS1Q9Y606 427 aaKnown RBP eCLIP6.85□□□□□ -1.31
VIPAS39-207ENST00000555854 IGKV3-7A0A075B6H7 116 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 TRAV14DV4A0A0A6YYC5 116 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 KIR2DL5BA0A0G2JN68 375 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 KIR2DL5BA0A0G2JPC4 375 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 TEX13DA0A0J9YY54 714 aaPredicted RBP6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 ANKRD20A5PA0PJZ0 165 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 GSTZ1O43708 216 aaPredicted RBP6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 CLN5O75503 358 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 TMEM50AO95807 157 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 AKAIN1P0CW23 69 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 TNFRSF9Q07011 255 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 IL18Q14116 193 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 SURF2Q15527 256 aaPredicted RBP6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 ZNF600Q6ZNG1 722 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 Q6ZWC4 215 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 LYG2Q86SG7 212 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms