RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 C2orf50Q96LR7 162 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 IMUPQ9GZP8 106 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 IL36BQ9NZH7 164 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 PCTPQ9UKL6 214 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 ZNF106Q9H2Y7 1883 aaKnown RBP2.47□□□□□ -2.01
VRK1-205ENST00000555402 DOCK6Q96HP0 2047 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 UBR2Q8IWV8 1755 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 DUXBA0A1W2PPF3 345 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 DEGS1O15121 323 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 NDUFA2O43678 99 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 CST8O60676 142 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 GADD45GO95257 159 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 RPL7P18124 248 aaKnown RBP2.46□□□□□ -2.02
VRK1-205ENST00000555402 GPX2P18283 190 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 BLVRBP30043 206 aaPredicted RBP2.46□□□□□ -2.02
VRK1-205ENST00000555402 SRIP30626 198 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 AKR1C3P42330 323 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 POLR2HP52434 150 aaKnown RBP2.46□□□□□ -2.02
VRK1-205ENST00000555402 CKS1BP61024 79 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 CCL20P78556 96 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 SPCS2Q15005 226 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 AADACL3Q5VUY0 350 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 RPL22L1Q6P5R6 122 aaKnown RBP2.46□□□□□ -2.02
VRK1-205ENST00000555402 CROCCP2Q86T23 111 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 ANGPTL5Q86XS5 388 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 OR4D11Q8NGI4 311 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 OR2J1Q9GZK6 312 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 C16orf95Q9H693 158 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 ECM29Q5VYK3 1845 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 DSCAML1Q8TD84 2053 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 MAST2Q6P0Q8 1798 aa2.46□□□□□ -2.02
VRK1-205ENST00000555402 CAMSAP2Q08AD1 1489 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 NUP210LQ5VU65 1888 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 SIPA1L1O43166 1804 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 TRAV36DV7A0A075B6V5 113 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 GGT3PA6NGU5 568 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 RFPL4AA6NLU0 287 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 C1orf196B1AJZ1 125 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 RFPL4AL1F8VTS6 287 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 NDUFB2O95178 105 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 PRM2P04554 102 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 CCL3P10147 92 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 RPS3P23396 243 aaKnown RBP eCLIP2.45□□□□□ -2.02
VRK1-205ENST00000555402 CASP1P29466 404 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 TAS2R20P59543 309 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 FOXF1Q12946 379 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 ZNF181Q2M3W8 571 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 LCA10Q71F78 164 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 TMEM86AQ8N2M4 240 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 LRRC18Q8N456 261 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 DNAJC9Q8WXX5 260 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 CGREF1Q99674 301 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 DERL1Q9BUN8 251 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 TTTY13Q9BZ97 58 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 SPANXCQ9NY87 97 aa2.45□□□□□ -2.02
VRK1-205ENST00000555402 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
VRK1-205ENST00000555402 XIRP1Q702N8 1843 aaKnown RBP2.45□□□□□ -2.02
VRK1-205ENST00000555402 PLXND1Q9Y4D7 1925 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 NLRC5Q86WI3 1866 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 A0A087WX48 190 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 TRAV38-1A0A0B4J264 116 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 A0A1B0GX51 115 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 TRAPPC2LH3BP13 241 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 CYB5BO43169 146 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 BPGMP07738 259 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 COX4I1P13073 169 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 OGNP20774 298 aaKnown RBP2.44□□□□□ -2.02
VRK1-205ENST00000555402 TAS2R30P59541 319 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 FKBP1CQ5VVH2 108 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 NUP35Q8NFH5 326 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 ADAT3Q96EY9 351 aaPredicted RBP2.44□□□□□ -2.02
VRK1-205ENST00000555402 MIEN1Q9BRT3 115 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 COPZ2Q9P299 210 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 NUBP2Q9Y5Y2 271 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 WDR7Q9Y4E6 1490 aa2.44□□□□□ -2.02
VRK1-205ENST00000555402 MYH10P35580 1976 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 DSCAMO60469 2012 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 BORCS7-ASMTA0A0B4J1R7 106 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 TRDV1A0A1B0GX56 115 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 C17orf51A8MQB3 221 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 ODF3BA8MYP8 253 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 BUB1B-PAK6H3BSN5 160 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 LEPROTO15243 131 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 CSRP1P21291 193 aaKnown RBP2.43□□□□□ -2.02
VRK1-205ENST00000555402 S100A4P26447 101 aaKnown RBP2.43□□□□□ -2.02
VRK1-205ENST00000555402 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
VRK1-205ENST00000555402 ZNF80P51504 273 aaPredicted RBP2.43□□□□□ -2.02
VRK1-205ENST00000555402 AGTRAPQ6RW13 159 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 HRCT1Q6UXD1 115 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 C2orf91Q6ZV80 131 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 CNEP1R1Q8N9A8 125 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 FGF13Q92913 245 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 TMEM126AQ9H061 195 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 RNF122Q9H9V4 155 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 TPT1P8Q9HAU6 139 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 SLC39A9Q9NUM3 307 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 LAMTOR3Q9UHA4 124 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 TRAPPC2LQ9UL33 140 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 PAIP2BQ9ULR5 123 aaKnown RBP2.43□□□□□ -2.02
VRK1-205ENST00000555402 CCL26Q9Y258 94 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms