RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 APOC4P55056 127 aa8.82□□□□□ -1
VRK1-204ENST00000555351 AP3S2P59780 193 aa8.82□□□□□ -1
VRK1-204ENST00000555351 ZNF600Q6ZNG1 722 aa8.82□□□□□ -1
VRK1-204ENST00000555351 Q6ZRM9 215 aa8.82□□□□□ -1
VRK1-204ENST00000555351 KIR2DL5AQ8N109 375 aa8.82□□□□□ -1
VRK1-204ENST00000555351 OR4X1Q8NH49 305 aa8.82□□□□□ -1
VRK1-204ENST00000555351 KIR2DL5BQ8NHK3 375 aa8.82□□□□□ -1
VRK1-204ENST00000555351 LHFPL5Q8TAF8 219 aa8.82□□□□□ -1
VRK1-204ENST00000555351 RHPN1-AS1Q9BWJ2 59 aa8.82□□□□□ -1
VRK1-204ENST00000555351 TP53TG1Q9Y2A0 90 aa8.82□□□□□ -1
VRK1-204ENST00000555351 TRAV30A0A087WSZ9 112 aa8.81□□□□□ -1
VRK1-204ENST00000555351 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
VRK1-204ENST00000555351 RPS10-NUDT3A0A1W2PQS6 291 aa8.81□□□□□ -1
VRK1-204ENST00000555351 ZNF701M0R085 212 aaPredicted RBP8.81□□□□□ -1
VRK1-204ENST00000555351 YIF1AO95070 293 aa8.81□□□□□ -1
VRK1-204ENST00000555351 TMEM50AO95807 157 aa8.81□□□□□ -1
VRK1-204ENST00000555351 SRPXP78539 464 aa8.81□□□□□ -1
VRK1-204ENST00000555351 ODF3L2Q3SX64 289 aa8.81□□□□□ -1
VRK1-204ENST00000555351 C2orf83Q53S99 150 aa8.81□□□□□ -1
VRK1-204ENST00000555351 TMEM268Q5VZI3 342 aa8.81□□□□□ -1
VRK1-204ENST00000555351 FAM90A2PQ658T7 463 aa8.81□□□□□ -1
VRK1-204ENST00000555351 Q6ZWC4 215 aa8.81□□□□□ -1
VRK1-204ENST00000555351 NOXA1Q86UR1 476 aa8.81□□□□□ -1
VRK1-204ENST00000555351 WFDC3Q8IUB2 231 aa8.81□□□□□ -1
VRK1-204ENST00000555351 RNASEH2CQ8TDP1 164 aaKnown RBP8.81□□□□□ -1
VRK1-204ENST00000555351 TMEM231Q9H6L2 316 aa8.81□□□□□ -1
VRK1-204ENST00000555351 VSIRQ9H7M9 311 aa8.81□□□□□ -1
VRK1-204ENST00000555351 CLN5O75503 358 aa8.8□□□□□ -1
VRK1-204ENST00000555351 SULT1A3P0DMM9 295 aa8.8□□□□□ -1
VRK1-204ENST00000555351 SULT1A4P0DMN0 295 aa8.8□□□□□ -1
VRK1-204ENST00000555351 SLC25A4P12235 298 aa8.8□□□□□ -1
VRK1-204ENST00000555351 ANXA3P12429 323 aa8.8□□□□□ -1
VRK1-204ENST00000555351 OPRK1P41145 380 aa8.8□□□□□ -1
VRK1-204ENST00000555351 ATP5IP56385 69 aaPredicted RBP8.8□□□□□ -1
VRK1-204ENST00000555351 PAFAH1B2P68402 229 aa8.8□□□□□ -1
VRK1-204ENST00000555351 TMEM187Q14656 261 aa8.8□□□□□ -1
VRK1-204ENST00000555351 SPINK9Q5DT21 86 aa8.8□□□□□ -1
VRK1-204ENST00000555351 TOMM20LQ6UXN7 152 aa8.8□□□□□ -1
VRK1-204ENST00000555351 TMEM230Q96A57 120 aa8.8□□□□□ -1
VRK1-204ENST00000555351 GPR146Q96CH1 333 aa8.8□□□□□ -1
VRK1-204ENST00000555351 RNF2Q99496 336 aa8.8□□□□□ -1
VRK1-204ENST00000555351 ZFAND3Q9H8U3 227 aa8.8□□□□□ -1
VRK1-204ENST00000555351 HEYLQ9NQ87 328 aaPredicted RBP8.8□□□□□ -1
VRK1-204ENST00000555351 CACNG5Q9UF02 275 aa8.8□□□□□ -1
VRK1-204ENST00000555351 IGHV3OR16-8A0A075B7F1 116 aa8.79□□□□□ -1
VRK1-204ENST00000555351 A0A0B4J2A0 478 aa8.79□□□□□ -1
VRK1-204ENST00000555351 DUXBA0A1W2PPF3 345 aa8.79□□□□□ -1
VRK1-204ENST00000555351 A0A1W2PS18 150 aa8.79□□□□□ -1
VRK1-204ENST00000555351 ZNF207O43670 478 aaKnown RBP8.79□□□□□ -1
VRK1-204ENST00000555351 IGHV3-48P01763 117 aa8.79□□□□□ -1
VRK1-204ENST00000555351 S100A5P33763 92 aa8.79□□□□□ -1
VRK1-204ENST00000555351 CCR6P51684 374 aa8.79□□□□□ -1
VRK1-204ENST00000555351 NMSQ5H8A3 153 aa8.79□□□□□ -1
VRK1-204ENST00000555351 ETFRF1Q6IPR1 90 aa8.79□□□□□ -1
VRK1-204ENST00000555351 TRIM63Q969Q1 353 aa8.79□□□□□ -1
VRK1-204ENST00000555351 OVOL2Q9BRP0 275 aa8.79□□□□□ -1
VRK1-204ENST00000555351 FNDC4Q9H6D8 234 aaPredicted RBP8.79□□□□□ -1
VRK1-204ENST00000555351 RETNQ9HD89 108 aa8.79□□□□□ -1
VRK1-204ENST00000555351 MCUBQ9NWR8 336 aa8.79□□□□□ -1
VRK1-204ENST00000555351 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
VRK1-204ENST00000555351 PUS1Q9Y606 427 aaKnown RBP eCLIP8.79□□□□□ -1
VRK1-204ENST00000555351 SELENOKQ9Y6D0 94 aa8.79□□□□□ -1
VRK1-204ENST00000555351 DNAH7Q8WXX0 4024 aa8.78□□□□□ -1
VRK1-204ENST00000555351 DFFBO76075 338 aa8.78□□□□□ -1
VRK1-204ENST00000555351 ATF4P18848 351 aaPredicted RBP8.78□□□□□ -1
VRK1-204ENST00000555351 SUPT4H1P63272 117 aaKnown RBP8.78□□□□□ -1
VRK1-204ENST00000555351 KLF9Q13886 244 aaPredicted RBP8.78□□□□□ -1
VRK1-204ENST00000555351 TMEM128Q5BJH2 165 aa8.78□□□□□ -1
VRK1-204ENST00000555351 LGI3Q8N145 548 aa8.78□□□□□ -1
VRK1-204ENST00000555351 TOMM5Q8N4H5 51 aa8.78□□□□□ -1
VRK1-204ENST00000555351 SLC24A4Q8NFF2 622 aa8.78□□□□□ -1
VRK1-204ENST00000555351 SLC25A21Q9BQT8 299 aaPredicted RBP8.78□□□□□ -1
VRK1-204ENST00000555351 RBM38Q9H0Z9 239 aaKnown RBP8.78□□□□□ -1
VRK1-204ENST00000555351 HSPB7Q9UBY9 170 aa8.78□□□□□ -1
VRK1-204ENST00000555351 V9GYH0 126 aa8.78□□□□□ -1
VRK1-204ENST00000555351 LCE6AA0A183 80 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 A0A1B0GU03 582 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 CEBPZOSA8MTT3 80 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 IGKV1-17P01599 117 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 AKR1C4P17516 323 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 NPPCP23582 126 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 CRYBB3P26998 211 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 YPEL3P61236 119 aaPredicted RBP8.77□□□□□ -1.01
VRK1-204ENST00000555351 TNFRSF9Q07011 255 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 SMCO1Q147U7 214 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 TCF24Q7RTU0 167 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 CCDC190Q86UF4 302 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 STPG3Q8N7X2 389 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 OR1S2Q8NGQ3 325 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 UBQLN2Q9UHD9 624 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 U3KQ87 197 aa8.77□□□□□ -1.01
VRK1-204ENST00000555351 SPRY2O43597 315 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 SLC25A6P12236 298 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 NPY1RP25929 384 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 ZNF79Q15937 498 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 PYDC2Q56P42 97 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 ZFAND6Q6FIF0 208 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 PRSS54Q6PEW0 395 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 LRTM2Q8N967 370 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 ST8SIA2Q92186 375 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms