RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TMED6Q8WW62 240 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 WDR61Q9GZS3 305 aaKnown RBP8.39□□□□□ -1.07
TDP1-211ENST00000555178 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 DFFBO76075 338 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 FGF7P21781 194 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 ATP6V0CP27449 155 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 RND2P52198 227 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 DLK1P80370 383 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 EXOSC2Q13868 293 aaKnown RBP8.38□□□□□ -1.07
TDP1-211ENST00000555178 ZNF266Q14584 549 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 KRTAP24-1Q3LI83 254 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 TCTEX1D4Q5JR98 221 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 TEX261Q6UWH6 196 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 BAP18Q8IXM2 172 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 C11orf44Q8N8P7 122 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 JTBO76095 146 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 TPT1P13693 172 aaKnown RBP8.38□□□□□ -1.07
TDP1-211ENST00000555178 C4BPBP20851 252 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 RHOGP84095 191 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 C18orf65Q6ZTR6 163 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 SCARB1Q8WTV0 552 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 NPIPB3Q92617 1050 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 MGST2Q99735 147 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 GON7Q9BXV9 100 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 ARV1Q9H2C2 271 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 SLC25A32Q9H2D1 315 aa8.38□□□□□ -1.07
TDP1-211ENST00000555178 WNK1Q9H4A3 2382 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 BORCS7-ASMTA0A0B4J1R7 106 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 HAX1O00165 279 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 GATA2P23769 480 aaPredicted RBP8.37□□□□□ -1.07
TDP1-211ENST00000555178 ATP5IP56385 69 aaPredicted RBP8.37□□□□□ -1.07
TDP1-211ENST00000555178 BTNL8Q6UX41 500 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 TMEM182Q6ZP80 229 aaPredicted RBP8.37□□□□□ -1.07
TDP1-211ENST00000555178 ZNF680Q8NEM1 530 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 WIPF2Q8TF74 440 aaPredicted RBP8.37□□□□□ -1.07
TDP1-211ENST00000555178 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 GINS3Q9BRX5 216 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 FBXL7Q9UJT9 491 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 LSM4Q9Y4Z0 139 aaKnown RBP8.37□□□□□ -1.07
TDP1-211ENST00000555178 IGKV1D-37A0A075B6S9 117 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 F8W735 103 aaPredicted RBP8.37□□□□□ -1.07
TDP1-211ENST00000555178 IFNA5P01569 189 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 IGLV1-40P01703 118 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 CRYBA1P05813 215 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 KIAA0141Q14154 515 aaPredicted RBP8.37□□□□□ -1.07
TDP1-211ENST00000555178 ATP6V1FQ16864 119 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 C15orf32Q32M92 178 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 SLC35E1Q96K37 410 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 GGACTQ9BVM4 153 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 NPCDR1Q9BY65 106 aa8.37□□□□□ -1.07
TDP1-211ENST00000555178 TRBV9A0A0B4J1U6 114 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 CORTO00230 105 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 EIF3GO75821 320 aaKnown RBP eCLIP8.36□□□□□ -1.07
TDP1-211ENST00000555178 PF4V1P10720 104 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
TDP1-211ENST00000555178 ZNF90Q03938 601 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 ACSM6Q6P461 480 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 KLHDC1Q8N7A1 406 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 C16orf95Q9H693 158 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 SLA2Q9H6Q3 261 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 VSIRQ9H7M9 311 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 NPVFQ9HCQ7 196 aa8.36□□□□□ -1.07
TDP1-211ENST00000555178 TRGV3P03979 118 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 RPLP1P05386 114 aaKnown RBP8.35□□□□□ -1.07
TDP1-211ENST00000555178 SPP1P10451 314 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 FHITP49789 147 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 ELLP55199 621 aaPredicted RBP8.35□□□□□ -1.07
TDP1-211ENST00000555178 TPPP2P59282 170 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 GCSAMLQ5JQS6 135 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 SCGB1C1Q8TD33 95 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 CACNG8Q8WXS5 425 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 TMEM68Q96MH6 324 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 GGTLC1Q9BX51 225 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 PSMB11A5LHX3 300 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 AGPAT2O15120 278 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 IGHV3-11P01762 117 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 CD28P10747 220 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 OR10J1P30954 320 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 PROK1P58294 105 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 MIC13Q5XKP0 118 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 TEPPQ6URK8 271 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 TMEM144Q7Z5S9 345 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 CENPVQ7Z7K6 275 aaPredicted RBP8.35□□□□□ -1.07
TDP1-211ENST00000555178 OR1L6Q8NGR2 347 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 CCDC140Q96MF4 163 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 OR5B12Q96R08 314 aa8.35□□□□□ -1.07
TDP1-211ENST00000555178 OR2T8A6NH00 312 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 NDUFA7O95182 113 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 IGHG4P01861 327 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 PSMB8P28062 276 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 CAMLGP49069 296 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 NECAP1Q8NC96 275 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 TMEM116Q8NCL8 245 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 OR2G3Q8NGZ4 309 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 TRRAPQ9Y4A5 3859 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 RPS10-NUDT3A0A1W2PQS6 291 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 ZFP92A6NM28 416 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 SCAF4O95104 1147 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms