RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
NEDD1-207ENST00000555114 Q6ZTC4 211 aa11.24□□□□□ -0.61
NEDD1-207ENST00000555114 GPX8Q8TED1 209 aa11.24□□□□□ -0.61
NEDD1-207ENST00000555114 RNF126Q9BV68 326 aa11.24□□□□□ -0.61
NEDD1-207ENST00000555114 TBC1D24Q9ULP9 559 aa11.24□□□□□ -0.61
NEDD1-207ENST00000555114 A0A1B0GU03 582 aa11.23□□□□□ -0.61
NEDD1-207ENST00000555114 CLN5O75503 358 aa11.23□□□□□ -0.61
NEDD1-207ENST00000555114 ZNF688P0C7X2 276 aa11.23□□□□□ -0.61
NEDD1-207ENST00000555114 CRYBB3P26998 211 aa11.23□□□□□ -0.61
NEDD1-207ENST00000555114 ZNF486Q96H40 463 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-207ENST00000555114 TRAV30A0A087WSZ9 112 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 HELTA6NFD8 242 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
NEDD1-207ENST00000555114 P0DMU3 169 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 FAM231AP0DMU4 169 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 FAM231CP0DMU5 169 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 PGAM2P15259 253 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 RPS19P39019 145 aaKnown RBP11.22□□□□□ -0.61
NEDD1-207ENST00000555114 AP2S1P53680 142 aaPredicted RBP11.22□□□□□ -0.61
NEDD1-207ENST00000555114 RND3P61587 244 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
NEDD1-207ENST00000555114 ACTL10Q5JWF8 245 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 OR4X1Q8NH49 305 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 X6R8D5 127 aa11.22□□□□□ -0.61
NEDD1-207ENST00000555114 DNAH6Q9C0G6 4158 aa11.21□□□□□ -0.61
NEDD1-207ENST00000555114 DEFB131BA0A096LNP1 70 aa11.21□□□□□ -0.61
NEDD1-207ENST00000555114 RPS10-NUDT3A0A1W2PQS6 291 aa11.21□□□□□ -0.61
NEDD1-207ENST00000555114 AMBPP02760 352 aa11.21□□□□□ -0.61
NEDD1-207ENST00000555114 RNASE2P10153 161 aaKnown RBP11.21□□□□□ -0.61
NEDD1-207ENST00000555114 C4BPBP20851 252 aa11.21□□□□□ -0.61
NEDD1-207ENST00000555114 NPY1RP25929 384 aa11.21□□□□□ -0.61
NEDD1-207ENST00000555114 RPL5P46777 297 aaKnown RBP11.21□□□□□ -0.61
NEDD1-207ENST00000555114 RNASE11Q8TAA1 199 aaKnown RBP11.21□□□□□ -0.61
NEDD1-207ENST00000555114 RRNAD1Q96FB5 475 aaKnown RBP11.21□□□□□ -0.61
NEDD1-207ENST00000555114 VCX3AQ9NNX9 186 aa11.21□□□□□ -0.61
NEDD1-207ENST00000555114 VPS13DQ5THJ4 4388 aa11.21□□□□□ -0.62
NEDD1-207ENST00000555114 ELOA3CA0A087WX78 387 aaPredicted RBP11.2□□□□□ -0.62
NEDD1-207ENST00000555114 ATP6V1G2O95670 118 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 APOA1P02647 267 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 TGFBR1P36897 503 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 PPP5CP53041 499 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 PIGPP57054 158 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 SNRPD3P62318 126 aaKnown RBP11.2□□□□□ -0.62
NEDD1-207ENST00000555114 DHRS2Q13268 280 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 IZUMO4Q1ZYL8 232 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 TRIM16LQ309B1 348 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 SNX29P2Q8IUI4 249 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 NDUFAF3Q9BU61 184 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 COMMD3Q9UBI1 195 aa11.2□□□□□ -0.62
NEDD1-207ENST00000555114 A0A0B4J293 547 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 IGKV1-5P01602 117 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 ETV6P41212 452 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 LSM3P62310 102 aaKnown RBP11.19□□□□□ -0.62
NEDD1-207ENST00000555114 PSMG4Q5JS54 123 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 POM121L12Q8N7R1 296 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 CCDC71LQ8N9Z2 235 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 Q8WTZ3 238 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
NEDD1-207ENST00000555114 C3orf85A0A1B0GTC6 90 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 B3GALNT1O75752 331 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEDD1-207ENST00000555114 TIGITQ495A1 244 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 RNASE10Q5GAN6 216 aaKnown RBP11.18□□□□□ -0.62
NEDD1-207ENST00000555114 ARRDC1Q8N5I2 433 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 CSNK1G2-AS1Q8NCQ2 148 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 OR1S2Q8NGQ3 325 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 TP53RKQ96S44 253 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 FNDC4Q9H6D8 234 aaPredicted RBP11.18□□□□□ -0.62
NEDD1-207ENST00000555114 PCLOQ9Y6V0 5065 aa11.18□□□□□ -0.62
NEDD1-207ENST00000555114 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 PRSS29PA6NIE9 313 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 M0QYG6 137 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 GSTZ1O43708 216 aaPredicted RBP11.17□□□□□ -0.62
NEDD1-207ENST00000555114 P0C879 139 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 PI3P19957 117 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 HTR2BP41595 481 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 ZFAND1Q8TCF1 268 aa11.17□□□□□ -0.62
NEDD1-207ENST00000555114 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
NEDD1-207ENST00000555114 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
NEDD1-207ENST00000555114 IGKV1-17P01599 117 aa11.16□□□□□ -0.62
NEDD1-207ENST00000555114 SLC25A4P12235 298 aa11.16□□□□□ -0.62
NEDD1-207ENST00000555114 TBPP20226 339 aa11.16□□□□□ -0.62
NEDD1-207ENST00000555114 SPCS3P61009 180 aa11.16□□□□□ -0.62
NEDD1-207ENST00000555114 C16orf54Q6UWD8 224 aa11.16□□□□□ -0.62
NEDD1-207ENST00000555114 FAM219AQ8IW50 185 aa11.16□□□□□ -0.62
NEDD1-207ENST00000555114 CELA1Q9UNI1 258 aa11.16□□□□□ -0.62
NEDD1-207ENST00000555114 AGRNO00468 2067 aa11.15□□□□□ -0.62
NEDD1-207ENST00000555114 TMEM189A5PLL7 270 aa11.15□□□□□ -0.62
NEDD1-207ENST00000555114 OR10J1P30954 320 aa11.15□□□□□ -0.62
NEDD1-207ENST00000555114 YPEL3P61236 119 aaPredicted RBP11.15□□□□□ -0.62
NEDD1-207ENST00000555114 MLANAQ16655 118 aa11.15□□□□□ -0.62
NEDD1-207ENST00000555114 BSXQ3C1V8 233 aa11.15□□□□□ -0.62
NEDD1-207ENST00000555114 ETFRF1Q6IPR1 90 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms