RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 OR4X1Q8NH49 305 aa7.89□□□□□ -1.15
SYNE2-215ENST00000554997 ZNF502Q8TBZ5 544 aa7.89□□□□□ -1.15
SYNE2-215ENST00000554997 C4orf3Q8WVX3 66 aa7.89□□□□□ -1.15
SYNE2-215ENST00000554997 GGACTQ9BVM4 153 aa7.89□□□□□ -1.15
SYNE2-215ENST00000554997 GNB4Q9HAV0 340 aa7.89□□□□□ -1.15
SYNE2-215ENST00000554997 GAR1Q9NY12 217 aaKnown RBP7.89□□□□□ -1.15
SYNE2-215ENST00000554997 C21orf62Q9NYP8 219 aa7.89□□□□□ -1.15
SYNE2-215ENST00000554997 MBD2Q9UBB5 411 aa7.89□□□□□ -1.15
SYNE2-215ENST00000554997 PEF1Q9UBV8 284 aaKnown RBP7.89□□□□□ -1.15
SYNE2-215ENST00000554997 TET2Q6N021 2002 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-215ENST00000554997 STAB1Q9NY15 2570 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 IGHV3-21A0A0B4J1V1 117 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 MFSD2BA6NFX1 497 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 G3V3Q6 166 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 HSPB1P04792 205 aaKnown RBP7.88□□□□□ -1.15
SYNE2-215ENST00000554997 LGALS1P09382 135 aaKnown RBP7.88□□□□□ -1.15
SYNE2-215ENST00000554997 RPL12P30050 165 aaKnown RBP7.88□□□□□ -1.15
SYNE2-215ENST00000554997 S100A11P31949 105 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 NPBWR1P48145 328 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 DEFA5Q01523 94 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 HIST2H2BDQ6DRA6 164 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 OR8G2PQ6IF36 304 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 AKAP14Q86UN6 197 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 TCTE3Q8IZS6 198 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 OR5B12Q96R08 314 aa7.88□□□□□ -1.15
SYNE2-215ENST00000554997 TRAV30A0A087WSZ9 112 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 A0A1W2PRX2 142 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 IGSF23A1L1A6 192 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 ANKRD34BA5PLL1 514 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 NUDT19A8MXV4 375 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 FNDC10F2Z333 226 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 F8W735 103 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-215ENST00000554997 CLN5O75503 358 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 CST7O76096 145 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 IGHV3-48P01763 117 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 IGHV3-23P01764 117 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 CTSGP08311 255 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 DLK1P80370 383 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 NHLH2Q02577 135 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 BAXQ07812 192 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 ARL16Q0P5N6 197 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 GAMTQ14353 236 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 ATP6V1FQ16864 119 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 NSUN5P1Q3KNT7 163 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 KHDC1LQ5JSQ8 128 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 ACSM6Q6P461 480 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 CLEC19AQ6UXS0 136 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 C18orf65Q6ZTR6 163 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 ZNF546Q86UE3 836 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 HAPLN4Q86UW8 402 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 STX12Q86Y82 276 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 KLHL30-AS1Q8NEE0 82 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 OR1N2Q8NGR9 330 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 SPATA3Q8NHX4 192 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 DCUN1D4Q92564 292 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 CCDC140Q96MF4 163 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 S4R3C0 116 aa7.87□□□□□ -1.15
SYNE2-215ENST00000554997 TENM1Q9UKZ4 2725 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 HMSDA8MTL9 139 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 SMLR1H3BR10 107 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 NUP62P37198 522 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-215ENST00000554997 MYCNOSP40205 109 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 HBG1P69891 147 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 HBG2P69892 147 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 EWSR1Q01844 656 aaKnown RBP eCLIP7.86□□□□□ -1.15
SYNE2-215ENST00000554997 Q56UQ5 140 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 SPSB3Q6PJ21 355 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 C8orf86Q6ZUL3 223 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 SLC16A13Q7RTY0 426 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 INO80EQ8NBZ0 244 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-215ENST00000554997 OR11H1Q8NG94 326 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 BSCL2Q96G97 398 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-215ENST00000554997 RAX2Q96IS3 184 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 NEURL2Q9BR09 285 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 NPVFQ9HCQ7 196 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 MRPL36Q9P0J6 103 aaKnown RBP7.86□□□□□ -1.15
SYNE2-215ENST00000554997 TNFSF18Q9UNG2 199 aa7.86□□□□□ -1.15
SYNE2-215ENST00000554997 OR2T8A6NH00 312 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 LINC01619G3V211 115 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 CCL24O00175 119 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 NUPL2O15504 423 aaKnown RBP7.85□□□□□ -1.15
SYNE2-215ENST00000554997 GNG7O60262 68 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 GGCTO75223 188 aaKnown RBP7.85□□□□□ -1.15
SYNE2-215ENST00000554997 TRBV12-3P01733 135 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 ARL3P36405 182 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 SLC38A11Q08AI6 406 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 VWC2Q2TAL6 325 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 ACOT7LQ6ZUV0 252 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 TMEM144Q7Z5S9 345 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 GPHB5Q86YW7 130 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 TMEM217Q8N7C4 229 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 UBAC2Q8NBM4 344 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 OR4F17Q8NGA8 305 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 OR11H4Q8NGC9 324 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 DPF1Q92782 380 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 ACY3Q96HD9 319 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 SLC35E1Q96K37 410 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 AQP10Q96PS8 301 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 OR4F4Q96R69 305 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms