RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MAGT1Q9H0U3 335 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 NUDT15Q9NV35 164 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 LSM4Q9Y4Z0 139 aaKnown RBP9.35□□□□□ -0.91
SYNE2-214ENST00000554928 IAPPP10997 89 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 GP9P14770 177 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 MFAP4P55083 255 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 CD300EQ496F6 205 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-214ENST00000554928 C2orf83Q53S99 150 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 SLC24A4Q8NFF2 622 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 DTD1Q8TEA8 209 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 TMEM190Q8WZ59 177 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 SIGLEC8Q9NYZ4 499 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 PEMTQ9UBM1 199 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 MLXQ9UH92 298 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
SYNE2-214ENST00000554928 FAM240BA0A1B0GVZ2 78 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 A8MWP6 167 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 CCSO14618 274 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 CBLN1P23435 193 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 FCGR2BP31994 310 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-214ENST00000554928 OPRK1P41145 380 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 HTR2BP41595 481 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 DEFB114Q30KQ6 69 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 FAM106AQ4KMX7 169 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 UXS1Q8NBZ7 420 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 MITD1Q8WV92 249 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 OR10C1Q96KK4 312 aa9.33□□□□□ -0.92
SYNE2-214ENST00000554928 TGP01266 2768 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 C15orf62A8K5M9 175 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 TMEM50AO95807 157 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 H2AFB2P0C5Z0 115 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 SLC25A6P12236 298 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 NPY1RP25929 384 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 SUB1P53999 127 aaKnown RBP eCLIP9.32□□□□□ -0.92
SYNE2-214ENST00000554928 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 PRSS54Q6PEW0 395 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 BTNL8Q6UX41 500 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 Q8N1Y9 231 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 COQ8AQ8NI60 647 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 ATP6V0BQ99437 205 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 C20orf24Q9BUV8 137 aa9.32□□□□□ -0.92
SYNE2-214ENST00000554928 IGHV3-49A0A0A0MS15 119 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 ZNF785A8K8V0 405 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 NDUFA4O00483 81 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 GNG7O60262 68 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 IFNA10P01566 189 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 C8orf88P0DMB2 117 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 POLR2GP62487 172 aaKnown RBP eCLIP9.31□□□□□ -0.92
SYNE2-214ENST00000554928 TIGITQ495A1 244 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 MZT2BQ6NZ67 158 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 NRARPQ7Z6K4 114 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 TMEM61Q8N0U2 210 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 DUSP18Q8NEJ0 188 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 OR4D5Q8NGN0 318 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 DYNLRB2Q8TF09 96 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 WDR89Q96FK6 387 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-214ENST00000554928 TXN2Q99757 166 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 HIPK2Q9H2X6 1198 aa9.31□□□□□ -0.92
SYNE2-214ENST00000554928 SORL1Q92673 2214 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 IGHV3OR16-13A0A075B7E8 117 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 IGHV3-74A0A0B4J1X5 117 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 H3BP45 60 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 CORTO00230 105 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 WRBO00258 174 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 NUPL2O15504 423 aaKnown RBP9.3□□□□□ -0.92
SYNE2-214ENST00000554928 CLN5O75503 358 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 IGKV1-17P01599 117 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 RND2P52198 227 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 ID3Q02535 119 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 TOMM20LQ6UXN7 152 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 OR4X1Q8NH49 305 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 ZNF431Q8TF32 576 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-214ENST00000554928 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 ZMAT5Q9UDW3 170 aaKnown RBP9.3□□□□□ -0.92
SYNE2-214ENST00000554928 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
SYNE2-214ENST00000554928 FAM90A26D6RGX4 464 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 SYNGR2O43760 224 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 YIF1AO95070 293 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 APOHP02749 345 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-214ENST00000554928 CD7P09564 240 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 IGLC1P0CG04 106 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 NPBWR1P48145 328 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 ELLP55199 621 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-214ENST00000554928 CD69Q07108 199 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 IAH1Q2TAA2 248 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-214ENST00000554928 SLC16A13Q7RTY0 426 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-214ENST00000554928 ENKURQ8TC29 256 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 RNASEH2CQ8TDP1 164 aaKnown RBP9.29□□□□□ -0.92
SYNE2-214ENST00000554928 NPIPB3Q92617 1050 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 ASCL2Q99929 193 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 PALMDQ9NP74 551 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
SYNE2-214ENST00000554928 U3KQ87 197 aa9.29□□□□□ -0.92
SYNE2-214ENST00000554928 PRSS46E5RG02 174 aa9.28□□□□□ -0.92
SYNE2-214ENST00000554928 CCNKO75909 580 aa9.28□□□□□ -0.92
SYNE2-214ENST00000554928 SCAF4O95104 1147 aaKnown RBP9.28□□□□□ -0.92
SYNE2-214ENST00000554928 SCGB1D2O95969 90 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms