RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HIST1H1BP16401 226 aaKnown RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 F2RP25116 425 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 PTBP1P26599 531 aaKnown RBP eCLIP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 G6PCP35575 357 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 LPAR6P43657 344 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 MFAP2P55001 183 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 LINC01547P58512 204 aaPredicted RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 ERVK-16P61578 105 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 RND3P61587 244 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 RPP30P78346 268 aaKnown RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 WT1-ASQ06250 92 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 SPCS2Q15005 226 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 THOC7Q6I9Y2 204 aaKnown RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 CLEC19AQ6UXS0 136 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 GPR141Q7Z602 305 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 SGPP2Q8IWX5 399 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 SLC38A6Q8IZM9 456 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 Q8N402 240 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 GDPD1Q8N9F7 314 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 OR10W1Q8NGF6 305 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 OR4D10Q8NGI6 311 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 OR2K2Q8NGT1 345 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 OR6F1Q8NGZ6 308 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF502Q8TBZ5 544 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 FCAMRQ8WWV6 532 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 CACNG8Q8WXS5 425 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 AP3S1Q92572 193 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 BORCS5Q969J3 196 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 MRGPRFQ96AM1 343 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 EEF1AKMT3Q96AZ1 226 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 DGCR14Q96DF8 476 aaKnown RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF414Q96IQ9 312 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 ABHD1Q96SE0 405 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 NDUFA4L2Q9NRX3 87 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 FAM212BQ9NTI7 297 aaPredicted RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 EXTL2Q9UBQ6 330 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 MTFP1Q9UDX5 166 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 NSG2Q9Y328 171 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 TEX50A0A1B0GTY4 177 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 SMIM31A0A1B0GVY4 71 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 FAM25AB3EWG3 89 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 FAM25CB3EWG5 89 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 FAM25GB3EWG6 89 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 H0Y980 276 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 K7EIM0 57 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TGOLN2O43493 480 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TPPPO94811 219 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 OR2C1O95371 312 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 DHFRP00374 187 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 IGKV1-5P01602 117 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 P0C879 139 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TRAPPC2P0DI81 140 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TRAPPC2BP0DI82 140 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 OR13C7P0DN81 318 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 DEFA4P12838 97 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 FOLR2P14207 255 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TBPP20226 339 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 GPR183P32249 361 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 ARL3P36405 182 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 PPP5CP53041 499 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TATDN3Q17R31 274 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 DEFB114Q30KQ6 69 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 LCN12Q6JVE5 192 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 UNQ9165/PRO28630Q6UXU0 137 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 GPHB5Q86YW7 130 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 LAX1Q8IWV1 398 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 CMTM1Q8IZ96 169 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 ARRDC1Q8N5I2 433 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM229BQ8NBD8 167 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 SLC24A4Q8NFF2 622 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 OR1L8Q8NGR8 309 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 DYNLRB2Q8TF09 96 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 LSM10Q969L4 123 aaKnown RBP3.1□□□□□ -1.91
VTI1B-203ENST00000554636 SEC22AQ96IW7 307 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 RCHY1Q96PM5 261 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 BCL7BQ9BQE9 202 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TM2D3Q9BRN9 247 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 COMMD5Q9GZQ3 224 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 WFDC10AQ9H1F0 79 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 ZC4H2Q9NQZ6 224 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM14BQ9NUH8 114 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 CCDC59Q9P031 241 aaKnown RBP3.1□□□□□ -1.91
VTI1B-203ENST00000554636 KLK11Q9UBX7 282 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 MLXQ9UH92 298 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 OR51B2Q9Y5P1 312 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 F11RQ9Y624 299 aaKnown RBP3.1□□□□□ -1.91
VTI1B-203ENST00000554636 KMT2AQ03164 3969 aa3.1□□□□□ -1.91
VTI1B-203ENST00000554636 VPS13DQ5THJ4 4388 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 DNAH10Q8IVF4 4471 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TRBV7-1A0A0A6YYK4 115 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 IGHV3-21A0A0B4J1V1 117 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 A0A0G2JRQ6 117 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 GABARAPH6UMI1 98 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CTDSP2O14595 271 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CTDSPLO15194 276 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 SNAPC5O75971 98 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 KRASP01116 189 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CD3DP04234 171 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CLEC3BP05452 202 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms