RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SERPINE2P07093 398 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 INAFM2P0DMQ5 153 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 FOLR2P14207 255 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 MUC1P15941 1255 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-226ENST00000554350 ADCYAP1P18509 176 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 RAB2AP61019 212 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 VAMP2P63027 116 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 RNF212Q495C1 297 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 TEX36Q5VZQ5 186 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 ATRAIDQ6UW56 229 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 Q6ZRG5 221 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 OR10G4Q8NGN3 311 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 OR10Z1Q8NGY1 313 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 NEK7Q8TDX7 302 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 SECTM1Q8WVN6 248 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 NARS2Q96I59 477 aaKnown RBP4.31□□□□□ -1.72
ATXN3-226ENST00000554350 CYYR1Q96J86 154 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 PSMG3Q9BT73 122 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-226ENST00000554350 SCRT1Q9BWW7 348 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 HRH4Q9H3N8 390 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 WFDC1Q9HC57 220 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 TREM1Q9NP99 234 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 CCL28Q9NRJ3 127 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 LIN7CQ9NUP9 197 aaKnown RBP4.31□□□□□ -1.72
ATXN3-226ENST00000554350 SIGLEC8Q9NYZ4 499 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 KCNIP1Q9NZI2 227 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 GAB2Q9UQC2 676 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 TBL2Q9Y4P3 447 aaKnown RBP4.31□□□□□ -1.72
ATXN3-226ENST00000554350 DNAH10Q8IVF4 4471 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 IGKV1D-13A0A0B4J2D9 117 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 A0A1W2PPH5 198 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 TMEM30CPA0ZSE6 113 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 FAM90A9PA6NNJ1 464 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 A8MZ25 164 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 WRBO00258 174 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 ITGB1BP1O14713 200 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 OVOL1O14753 267 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 TXNL1O43396 289 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 SCGB1D2O95969 90 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 IGF1P05019 195 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 IGKV1-13P0DP09 117 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 ZNF44P15621 663 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 GZMHP20718 246 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 MAS1LP35410 378 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 CAMLGP49069 296 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 SULT1A1P50225 295 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 PAX9P55771 341 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 POLR2GP62487 172 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATXN3-226ENST00000554350 SERF2P84101 59 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 HTD2P86397 168 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 GUK1Q16774 197 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 ATP6V1FQ16864 119 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 TMEM30BQ3MIR4 351 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 CXorf66Q5JRM2 361 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-226ENST00000554350 WDR86Q86TI4 376 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 HAPLN4Q86UW8 402 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 STX12Q86Y82 276 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 FOXRED2Q8IWF2 684 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 C15orf54Q8N8G6 183 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 OR11H1Q8NG94 326 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 PLPPR1Q8TBJ4 325 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 CD300LFQ8TDQ1 290 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 GALMQ96C23 342 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 GPR146Q96CH1 333 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 C18orf15Q96N68 181 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 ATP5SQ99766 215 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 SLC35B3Q9H1N7 401 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 RAB9BQ9NP90 201 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 SMCO4Q9NRQ5 59 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 C19orf12Q9NSK7 152 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 TRAPPC2LQ9UL33 140 aa4.3□□□□□ -1.72
ATXN3-226ENST00000554350 IGSF23A1L1A6 192 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 FAM24AA6NFZ4 105 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 FAM74A7A6NL05 159 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 C16orf90A8MZG2 172 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 CDIPTO14735 213 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 SYNGR2O43760 224 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 CDK2AP2O75956 126 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 NXPH2O95156 264 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 HAND1O96004 215 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 IFNA5P01569 189 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 HSPB1P04792 205 aaKnown RBP4.29□□□□□ -1.72
ATXN3-226ENST00000554350 SFTA3P0C7M3 94 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 OR8U9P0C7N5 309 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 RCC1P18754 421 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-226ENST00000554350 ATP6V0CP27449 155 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 TAGLN2P37802 199 aaKnown RBP4.29□□□□□ -1.72
ATXN3-226ENST00000554350 GABRA2P47869 451 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 DYNLT3P51808 116 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 HBG1P69891 147 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 HBG2P69892 147 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 CATR1Q13166 79 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 EIF4EBP1Q13541 118 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-226ENST00000554350 RHEBQ15382 184 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 AARDQ4LEZ3 155 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 FAM74A3Q4VXF1 159 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 ZNF585BQ52M93 769 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 SMUG1Q53HV7 270 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms