RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 TMEM231Q9H6L2 316 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 RPS10P5Q9NQ39 176 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 KCNIP1Q9NZI2 227 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 KIAA1456Q9P272 454 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 OR2W1Q9Y3N9 320 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 A0A1W2PN81 502 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 FAM24AA6NFZ4 105 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 ZNF98A6NK75 572 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 B4DEV8 164 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 NBR2O15453 112 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 TGOLN2O43493 480 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 NDUFS6O75380 124 aaKnown RBP6.85□□□□□ -1.31
TDP1-208ENST00000553989 SCTP09683 121 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 FRMD6-AS1P0C7T7 363 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 GP9P14770 177 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 F2RP25116 425 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 CHRNA7P36544 502 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 RAB9AP51151 201 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 ZNF134P52741 427 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 ZNF137PP52743 207 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 SLURP1P55000 103 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 PMS2P11Q13670 270 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 CLINT1Q14677 625 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 PLGLAQ15195 96 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 MSMO1Q15800 293 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 NMSQ5H8A3 153 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 AKR1C8PQ5T2L2 129 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 ASPHD1Q5U4P2 390 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 STX12Q86Y82 276 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 CBLN2Q8IUK8 224 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 GAPTQ8N292 157 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 TCTEX1D1Q8N7M0 179 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 ZNF439Q8NDP4 499 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 SCGB1C1Q8TD33 95 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 RXFP4Q8TDU9 374 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 MRPL20Q9BYC9 149 aaKnown RBP6.85□□□□□ -1.31
TDP1-208ENST00000553989 ZNF580Q9UK33 172 aa6.85□□□□□ -1.31
TDP1-208ENST00000553989 A0A087WWC5 75 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 IGHV7-81A0A0B4J1V7 117 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 C9JQL5 133 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 FAM90A26D6RGX4 464 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 LINC01619G3V211 115 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 M0R036 132 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 SCAF4O95104 1147 aaKnown RBP6.84□□□□□ -1.31
TDP1-208ENST00000553989 HLA-DRB1P01911 266 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 HSPB1P04792 205 aaKnown RBP6.84□□□□□ -1.31
TDP1-208ENST00000553989 CNTFRP26992 372 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 ATP6V0CP27449 155 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 PPIFP30405 207 aaKnown RBP6.84□□□□□ -1.31
TDP1-208ENST00000553989 PPP1CCP36873 323 aaKnown RBP6.84□□□□□ -1.31
TDP1-208ENST00000553989 SULT1A1P50225 295 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 PPT1P50897 306 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 POLR2GP62487 172 aaKnown RBP eCLIP6.84□□□□□ -1.31
TDP1-208ENST00000553989 SERF2P84101 59 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 ATP6V1FQ16864 119 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 KHDC3LQ587J8 217 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 ZFAND6Q6FIF0 208 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 H1FOOQ8IZA3 346 aaPredicted RBP6.84□□□□□ -1.31
TDP1-208ENST00000553989 OR52L2PQ8NGH6 319 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 FAM213BQ8TBF2 198 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 MYOZ3Q8TDC0 251 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 ARPC1AQ92747 370 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 DLX4Q92988 240 aaPredicted RBP6.84□□□□□ -1.31
TDP1-208ENST00000553989 CCDC140Q96MF4 163 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 ATP5SQ99766 215 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 CABLES2Q9BTV7 478 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 PARD6GQ9BYG4 376 aaPredicted RBP6.84□□□□□ -1.31
TDP1-208ENST00000553989 CCL28Q9NRJ3 127 aa6.84□□□□□ -1.31
TDP1-208ENST00000553989 IGHV4OR15-8A0A075B7B6 117 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 A0A087WW49 117 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 IGLV1-40P01703 118 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 RAB5AP20339 215 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 TAGLN2P37802 199 aaKnown RBP6.83□□□□□ -1.32
TDP1-208ENST00000553989 MEOX2P50222 304 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 AKR1D1P51857 326 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 HBG1P69891 147 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 HBG2P69892 147 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 HLA-DRB3P79483 266 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 RUNX1Q01196 453 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 C5orf64Q2M2E5 130 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 MORN2Q502X0 79 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 ZNF506Q5JVG8 444 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 TMEM182Q6ZP80 229 aaPredicted RBP6.83□□□□□ -1.32
TDP1-208ENST00000553989 ZNF818PQ6ZRF7 136 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 HSD17B11Q8NBQ5 300 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 OR5C1Q8NGR4 320 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 MRPL30Q8TCC3 161 aaKnown RBP6.83□□□□□ -1.32
TDP1-208ENST00000553989 CD300LFQ8TDQ1 290 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 SFT2D1Q8WV19 159 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 TCTEX1D2Q8WW35 142 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 HIST1H2BAQ96A08 127 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 PINX1Q96BK5 328 aaKnown RBP6.83□□□□□ -1.32
TDP1-208ENST00000553989 BSCL2Q96G97 398 aaPredicted RBP6.83□□□□□ -1.32
TDP1-208ENST00000553989 OR4C12Q96R67 309 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 CLCC1Q96S66 551 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 PSMG3Q9BT73 122 aaPredicted RBP6.83□□□□□ -1.32
TDP1-208ENST00000553989 GAR1Q9NY12 217 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms