RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PROSCO94903 275 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 RPP14O95059 124 aaKnown RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 PDYNP01213 254 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 C1QAP02745 245 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 PSKH1P11801 424 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 MYL12AP19105 171 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 PSMB3P49720 205 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 GDI2P50395 445 aaKnown RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ACTBP60709 375 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 RBX1P62877 108 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ACTG1P63261 375 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 MRPS15P82914 257 aaKnown RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 MLLT11Q13015 90 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 STX5Q13190 355 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 PPP1R1AQ13522 171 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 POU6F1Q14863 301 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 EBPQ15125 230 aaKnown RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 SPA17Q15506 151 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF791Q3KP31 576 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 DEFB134Q4QY38 66 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 TRMT12Q53H54 448 aaKnown RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 SPIN4Q56A73 249 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 COQ5Q5HYK3 327 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 PPP1R2P3Q6NXS1 205 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ATP5L2Q7Z4Y8 100 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 C10orf67Q8IYJ2 551 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 OSR2Q8N2R0 312 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 OR9I1Q8NGQ6 314 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 SKA2Q8WVK7 121 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 RAB8BQ92930 207 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ITFG2Q969R8 447 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ABHD14BQ96IU4 210 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 OR7D2Q96RA2 312 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 SHANK2-AS3Q9BTD1 123 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 GTSF1LQ9H1H1 148 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ABCG5Q9H222 651 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF586Q9NXT0 402 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 TP53TG1Q9Y2A0 90 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 POLR1DQ9Y2S0 133 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 HDGFL3Q9Y3E1 203 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 SCN3AQ9NY46 2000 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 EML6Q6ZMW3 1958 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 HEATR5AQ86XA9 2040 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 EPPK1P58107 5090 aaKnown RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 A0A087X0T9 212 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 A0A0B4J2C4 111 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 C4orf51C9J302 202 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 C8orf87E5RJ46 101 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 TMEM250H0YL14 139 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 ISLRO14498 428 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 ACOX3O15254 700 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CST8O60676 142 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 IFNA5P01569 189 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 FAM228BP0C875 321 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 C8orf88P0DMB2 117 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 MSNP26038 577 aaKnown RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CNTFRP26992 372 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 ATP6V0CP27449 155 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CRABP1P29762 137 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 DDTP30046 118 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CDK9P50750 372 aaKnown RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 KLF3P57682 345 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 MRPS25P82663 173 aaKnown RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 HPCAP84074 193 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 MMDQ15546 238 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 C4orf26Q17RF5 130 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 ACSBG2Q5FVE4 666 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CLVS2Q5SYC1 327 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 EBLN2Q6P2I7 272 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 TBPL2Q6SJ96 375 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 SBSNQ6UWP8 590 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 Q6ZQT7 251 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 FAM19A5Q7Z5A7 132 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 FAM19A3Q7Z5A8 133 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 NAA40Q86UY6 237 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 COMMD7Q86VX2 200 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CNEP1R1Q8N9A8 125 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 OR10D3Q8NH80 312 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 OR4A5Q8NH83 315 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 ASB13Q8WXK3 278 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CHMP6Q96FZ7 201 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CCDC42Q96M95 316 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 OR2V2Q96R30 315 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CDCA4Q9BXL8 241 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 OR8D2Q9GZM6 311 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 DERL2Q9GZP9 239 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 AICDAQ9GZX7 198 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 DUSP21Q9H596 190 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 VSIRQ9H7M9 311 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 LINC00574Q9H8X3 128 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 HES4Q9HCC6 221 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 BABAM2Q9NXR7 383 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 TAS2R1Q9NYW7 299 aa1.73□□□□□ -2.13
SCFD1-210ENST00000553693 BOKQ9UMX3 212 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 CHCHD2Q9Y6H1 151 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-210ENST00000553693 YLPM1P49750 1951 aaKnown RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 IGHV3OR16-8A0A075B7F1 116 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF729A6NN14 1252 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 PSMD12O00232 456 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 CXCR6O00574 342 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms