RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C4orf46Q504U0 113 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 DUSP18Q8NEJ0 188 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 DTD1Q8TEA8 209 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 DYNLRB2Q8TF09 96 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 ZNF414Q96IQ9 312 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 FNDC4Q9H6D8 234 aaPredicted RBP13.98□□□□□ -0.17
CPSF2-202ENST00000553427 U3KQ87 197 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 RPS10-NUDT3A0A1W2PQS6 291 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 GNG7O60262 68 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 NPY1RP25929 384 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 OPRK1P41145 380 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 DEFB114Q30KQ6 69 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 GGNBP1Q5YKI7 109 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 MZT2BQ6NZ67 158 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 MITD1Q8WV92 249 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 TMEM170AQ8WVE7 144 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 RBKSQ9H477 322 aa13.97□□□□□ -0.17
CPSF2-202ENST00000553427 DAZ1Q9NQZ3 744 aaKnown RBP13.97□□□□□ -0.17
CPSF2-202ENST00000553427 IGHV3-35A0A0C4DH35 117 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 K7EMT4 169 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 NXPH3O95157 252 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 HOXB5P09067 269 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 DEFB121Q5J5C9 76 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 OR4X1Q8NH49 305 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 B9D2Q9BPU9 175 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 NUDT15Q9NV35 164 aa13.96□□□□□ -0.17
CPSF2-202ENST00000553427 MRPL27Q9P0M9 148 aaKnown RBP13.96□□□□□ -0.17
CPSF2-202ENST00000553427 C15orf62A8K5M9 175 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 MED6O75586 246 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 IGHV3-48P01763 117 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 SLC25A4P12235 298 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 EDN2P20800 178 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 CD300EQ496F6 205 aaPredicted RBP13.95□□□□□ -0.18
CPSF2-202ENST00000553427 TM4SF20Q53R12 229 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 UXS1Q8NBZ7 420 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 CACNG8Q8WXS5 425 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 OR10C1Q96KK4 312 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 SMAD5-AS1Q9Y6J3 95 aa13.95□□□□□ -0.18
CPSF2-202ENST00000553427 FAM240BA0A1B0GVZ2 78 aa13.94□□□□□ -0.18
CPSF2-202ENST00000553427 CLN5O75503 358 aa13.94□□□□□ -0.18
CPSF2-202ENST00000553427 SCGB2A1O75556 95 aa13.94□□□□□ -0.18
CPSF2-202ENST00000553427 IFNA21P01568 189 aa13.94□□□□□ -0.18
CPSF2-202ENST00000553427 C11orf87Q6NUJ2 197 aa13.94□□□□□ -0.18
CPSF2-202ENST00000553427 TMEM116Q8NCL8 245 aa13.94□□□□□ -0.18
CPSF2-202ENST00000553427 CIB3Q96Q77 187 aaPredicted RBP13.94□□□□□ -0.18
CPSF2-202ENST00000553427 MRPL36Q9P0J6 103 aaKnown RBP13.94□□□□□ -0.18
CPSF2-202ENST00000553427 MLXQ9UH92 298 aa13.94□□□□□ -0.18
CPSF2-202ENST00000553427 IZUMO1RA6ND01 250 aa13.93□□□□□ -0.18
CPSF2-202ENST00000553427 ADAP1O75689 374 aa13.93□□□□□ -0.18
CPSF2-202ENST00000553427 TMEM50AO95807 157 aa13.93□□□□□ -0.18
CPSF2-202ENST00000553427 IFNA10P01566 189 aa13.93□□□□□ -0.18
CPSF2-202ENST00000553427 ETFRF1Q6IPR1 90 aa13.93□□□□□ -0.18
CPSF2-202ENST00000553427 ZNF600Q6ZNG1 722 aa13.93□□□□□ -0.18
CPSF2-202ENST00000553427 TRAV6A0A075B6T7 132 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 TRAV30A0A087WSZ9 112 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 TRAV25A0A0B4J276 109 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 H2AFB2P0C5Z0 115 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 IFITM3Q01628 133 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 PRSS54Q6PEW0 395 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 Q8N1Y9 231 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 C20orf24Q9BUV8 137 aa13.92□□□□□ -0.18
CPSF2-202ENST00000553427 ZNF785A8K8V0 405 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 SYNGR2O43760 224 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 ID3Q02535 119 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 MLANAQ16655 118 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 BTNL8Q6UX41 500 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 GTSCR1Q86UQ5 136 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 TMEM61Q8N0U2 210 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 OR52B4Q8NGK2 314 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 OR4D5Q8NGN0 318 aa13.91□□□□□ -0.18
CPSF2-202ENST00000553427 ZNF431Q8TF32 576 aaPredicted RBP13.91□□□□□ -0.18
CPSF2-202ENST00000553427 COL7A1Q02388 2944 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 MPTX1A8MV57 137 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 A8MZ25 164 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 IGKV1-17P01599 117 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 IGLC1P0CG04 106 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 GPX4P36969 197 aaPredicted RBP13.9□□□□□ -0.18
CPSF2-202ENST00000553427 CD69Q07108 199 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 SLC16A13Q7RTY0 426 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 OR1S2Q8NGQ3 325 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 ENKURQ8TC29 256 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 GINS3Q9BRX5 216 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 ZFAND3Q9H8U3 227 aa13.9□□□□□ -0.18
CPSF2-202ENST00000553427 YIF1AO95070 293 aa13.89□□□□□ -0.19
CPSF2-202ENST00000553427 IFNA4P05014 189 aa13.89□□□□□ -0.19
CPSF2-202ENST00000553427 IL5P05113 134 aa13.89□□□□□ -0.19
CPSF2-202ENST00000553427 IAPPP10997 89 aa13.89□□□□□ -0.19
CPSF2-202ENST00000553427 RND2P52198 227 aa13.89□□□□□ -0.19
CPSF2-202ENST00000553427 RAB11AP62491 216 aa13.89□□□□□ -0.19
CPSF2-202ENST00000553427 RPP30P78346 268 aaKnown RBP13.89□□□□□ -0.19
CPSF2-202ENST00000553427 WDR89Q96FK6 387 aaPredicted RBP13.89□□□□□ -0.19
CPSF2-202ENST00000553427 SMPXQ9UHP9 88 aa13.89□□□□□ -0.19
CPSF2-202ENST00000553427 PUS1Q9Y606 427 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPSF2-202ENST00000553427 IGHV3OR16-8A0A075B7F1 116 aa13.88□□□□□ -0.19
CPSF2-202ENST00000553427 IGHV7-4-1A0A0J9YVY3 117 aa13.88□□□□□ -0.19
CPSF2-202ENST00000553427 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
CPSF2-202ENST00000553427 IAH1Q2TAA2 248 aaPredicted RBP13.88□□□□□ -0.19
CPSF2-202ENST00000553427 SEC22CQ9BRL7 303 aa13.88□□□□□ -0.19
CPSF2-202ENST00000553427 MAGT1Q9H0U3 335 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms