RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 UHRF1BP1Q6BDS2 1440 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 ZSWIM8A7E2V4 1837 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 A0A087X0T9 212 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 CST8O60676 142 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 PSMD8P48556 350 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 FXYD2P54710 66 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 ALX1Q15699 326 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 OR8D4Q8NGM9 314 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 PLEKHB2Q96CS7 222 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 C20orf166-AS1Q96NR2 134 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 BATF3Q9NR55 127 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 CKLFQ9UBR5 152 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 CCL26Q9Y258 94 aa3.03□□□□□ -1.92
SCFD1-208ENST00000553278 MYO16Q9Y6X6 1858 aa3.03□□□□□ -1.93
SCFD1-208ENST00000553278 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 IGHV1-18A0A0C4DH31 117 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 MUC21A0A0G2JKD1 596 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 TRBV10-2A0A0K0K1G8 114 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 MUC21A0A140T8X8 626 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 ZNF860A6NHJ4 632 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 NBEAP1P0C6P0 100 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 S100GP29377 79 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 SRP14P37108 136 aaKnown RBP3.02□□□□□ -1.93
SCFD1-208ENST00000553278 EIF5AP63241 154 aaKnown RBP3.02□□□□□ -1.93
SCFD1-208ENST00000553278 SUPT4H1P63272 117 aaKnown RBP3.02□□□□□ -1.93
SCFD1-208ENST00000553278 Q8NDZ9 215 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 OR52R1Q8NGF1 315 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 PFN4Q8NHR9 129 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 Q9BRP9 147 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 WDR90Q96KV7 1748 aa3.02□□□□□ -1.93
SCFD1-208ENST00000553278 ECM29Q5VYK3 1845 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 A0A1W2PNU3 283 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-208ENST00000553278 RFPL4AA6NLU0 287 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 E7EQ34 232 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 RFPL4AL1F8VTS6 287 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 PIAS1O75925 651 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 TCL1BO95988 128 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 DEFA4P12838 97 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 ERHP84090 104 aaKnown RBP3.01□□□□□ -1.93
SCFD1-208ENST00000553278 BCL2L15Q5TBC7 163 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 DPPA3Q6W0C5 159 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 SIGLECL1Q8N7X8 197 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 NUP35Q8NFH5 326 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 OR4X2Q8NGF9 303 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 GRPEL2Q8TAA5 225 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 SKA2Q8WVK7 121 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-208ENST00000553278 DOHHQ9BU89 302 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 OR2J1Q9GZK6 312 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 TMEM133Q9H2Q1 129 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 MED11Q9P086 117 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 GREB1Q4ZG55 1949 aa3.01□□□□□ -1.93
SCFD1-208ENST00000553278 ARHGAP32A7KAX9 2087 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 FNDC10F2Z333 226 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 TAX1BP3O14907 124 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 IGKV1-16P04430 117 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 CSN2P05814 226 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 P0C880 135 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 TMEM258P61165 79 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 NDUFA5Q16718 116 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 FAM27BQ5VT28 67 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 WFDC5Q8TCV5 224 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 SLAMF6Q96DU3 332 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 HIST1H2BLQ99880 126 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 LAMTOR3Q9UHA4 124 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 PCTPQ9UKL6 214 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 HSPB11Q9Y547 144 aa3□□□□□ -1.93
SCFD1-208ENST00000553278 HEATR5AQ86XA9 2040 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 A0A0D9SG52 128 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 LOC105371267A0A1B0GV96 52 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 A0A1W2PRE2 83 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 TMEM212A6NML5 194 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 OGNP20774 298 aaKnown RBP2.99□□□□□ -1.93
SCFD1-208ENST00000553278 KHDC3LQ587J8 217 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 TOMM20LQ6UXN7 152 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 CROCCP2Q86T23 111 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 TMEM86AQ8N2M4 240 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 OR13D1Q8NGV5 346 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 MBD3L1Q8WWY6 194 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 CCDC32Q9BV29 185 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 EPDR1Q9UM22 224 aa2.99□□□□□ -1.93
SCFD1-208ENST00000553278 SLIT2O94813 1529 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 GGCTO75223 188 aaKnown RBP2.98□□□□□ -1.93
SCFD1-208ENST00000553278 IFNA14P01570 189 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 TAF9Q16594 264 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 LTC4SQ16873 150 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 TMEM128Q5BJH2 165 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 SAMD13Q5VXD3 122 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 STAG3L4Q8TBR4 150 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 YPEL2Q96QA6 119 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 C8orf4Q9NR00 106 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 GINS2Q9Y248 185 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 SDK2Q58EX2 2172 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 MALRD1Q5VYJ5 2156 aa2.98□□□□□ -1.93
SCFD1-208ENST00000553278 FHAD1B1AJZ9 1412 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 TMSB15BA0A087X1C1 80 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 IGKV1-9A0A0C4DH69 117 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 A0A0D9SEW6 157 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 PRORSD1PA6NEY8 169 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms