RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TMEM190Q8WZ59 177 aa8.92□□□□□ -0.98
TRAFD1-209ENST00000552896 ZC4H2Q9NQZ6 224 aa8.92□□□□□ -0.98
TRAFD1-209ENST00000552896 U3KQ87 197 aa8.92□□□□□ -0.98
TRAFD1-209ENST00000552896 TGP01266 2768 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 C2orf70A6NJV1 201 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 NDUFA4O00483 81 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 NUPL2O15504 423 aaKnown RBP8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 GNG7O60262 68 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 LY86O95711 162 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 ADMP35318 185 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 NPBWR1P48145 328 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 ATP5IP56385 69 aaPredicted RBP8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 RELQ04864 619 aaPredicted RBP8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 C11orf87Q6NUJ2 197 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 DUSP18Q8NEJ0 188 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 TMEM170AQ8WVE7 144 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 CIB3Q96Q77 187 aaPredicted RBP8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 SEC22CQ9BRL7 303 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 CHRDL1Q9BU40 450 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 FNDC4Q9H6D8 234 aaPredicted RBP8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 PALMDQ9NP74 551 aa8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 ZNF256Q9Y2P7 627 aaPredicted RBP8.91□□□□□ -0.98
TRAFD1-209ENST00000552896 TMEM213A2RRL7 107 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 MPTX1A8MV57 137 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 SYNGR2O43760 224 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 SCGB2A1O75556 95 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 IFNA10P01566 189 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 CTSGP08311 255 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 SLC25A4P12235 298 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 ELLP55199 621 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 DCTN2Q13561 401 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 LCN12Q6JVE5 192 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 UNQ9165/PRO28630Q6UXU0 137 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 NRARPQ7Z6K4 114 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 OR4D5Q8NGN0 318 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 OR2K2Q8NGT1 345 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 OR4X1Q8NH49 305 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 DAZ1Q9NQZ3 744 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 UFC1Q9Y3C8 167 aa8.9□□□□□ -0.98
TRAFD1-209ENST00000552896 IGHV3-35A0A0C4DH35 117 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 WI2-2373I1.2A0A1W2PRP0 233 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 ZNF320A2RRD8 509 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 K7EIL1 84 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 PRAF2O60831 178 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 IGHV3-48P01763 117 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 IL5P05113 134 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 SPNP16150 400 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 IAH1Q2TAA2 248 aaPredicted RBP8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 ETFRF1Q6IPR1 90 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 ADAMTSL5Q6ZMM2 481 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 HAPLN4Q86UW8 402 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 MRAPQ8TCY5 172 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 DYNLRB2Q8TF09 96 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 MARC2Q969Z3 335 aa8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 TECRQ9NZ01 308 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-209ENST00000552896 C15orf62A8K5M9 175 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 CLN5O75503 358 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 IAPPP10997 89 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 FOLR2P14207 255 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 GP9P14770 177 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 CBLN1P23435 193 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 NKX2-1P43699 371 aaPredicted RBP8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 RPP30P78346 268 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 ID3Q02535 119 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 SLC16A13Q7RTY0 426 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 C12orf45Q8N5I9 185 aaPredicted RBP8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 ZBTB8BQ8NAP8 495 aaPredicted RBP8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 TMEM116Q8NCL8 245 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 ZNF414Q96IQ9 312 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 OR10C1Q96KK4 312 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 PRR25Q96S07 402 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 MAGT1Q9H0U3 335 aa8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 GPN1Q9HCN4 374 aaPredicted RBP8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 MRPL36Q9P0J6 103 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-209ENST00000552896 COL7A1Q02388 2944 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 WRBO00258 174 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 CCSO14618 274 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 IFNA4P05014 189 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 C8orf88P0DMB2 117 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 EDN2P20800 178 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 RND2P52198 227 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 RAB11AP62491 216 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 CD69Q07108 199 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 PRSS54Q6PEW0 395 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 ZNF600Q6ZNG1 722 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 CACNG8Q8WXS5 425 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 MARVELD1Q9BSK0 173 aa8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 MRPL27Q9P0M9 148 aaKnown RBP8.87□□□□□ -0.99
TRAFD1-209ENST00000552896 SNRPGP15A8MWD9 76 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 INMT-MINDY4F8WBC2 141 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 K7EMT4 169 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 SSSCA1O60232 199 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 TMEM50AO95807 157 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 PTTG1O95997 202 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 IGKV1-17P01599 117 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 IGLC1P0CG04 106 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 POLR2GP62487 172 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 DEFB114Q30KQ6 69 aa8.86□□□□□ -0.99
TRAFD1-209ENST00000552896 CD300EQ496F6 205 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms