RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 DNAJC4Q9NNZ3 241 aa11.21□□□□□ -0.62
RAB3IP-216ENST00000552199 HILPDAQ9Y5L2 63 aa11.21□□□□□ -0.62
RAB3IP-216ENST00000552199 FCN1O00602 326 aa11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 PFN1P07737 140 aaKnown RBP11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 C8orf88P0DMB2 117 aa11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 SELENOTP62341 195 aa11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 LHFPL4Q7Z7J7 247 aa11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
RAB3IP-216ENST00000552199 IGHV2-5P01817 119 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 APELAP0DMC3 54 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 RPL35P42766 123 aaKnown RBP11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 AKR1D1P51857 326 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 ZNF90Q03938 601 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 PLGLAQ15195 96 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 OR5T1Q8NG75 326 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 UBE2CO00762 179 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 OR7C2O60412 319 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 GALR1P47211 349 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 PAX2Q02962 417 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 FAM167A-AS1Q96KT0 104 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 OR5B12Q96R08 314 aa11.19□□□□□ -0.62
RAB3IP-216ENST00000552199 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 A0A1W2PRD5 423 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 A0A1W2PRF3 423 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 A0A1W2PRM7 423 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 AP4M1O00189 453 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 CORTO00230 105 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 TGOLN2O43493 480 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 COX7A2P2O60397 106 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 MOSP00540 346 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 MMDQ15546 238 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 RUSC1-AS1Q66K80 236 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 NECAP1Q8NC96 275 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 TMEM116Q8NCL8 245 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 NPBQ8NG41 125 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 PFDN5Q99471 154 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 SRSF8Q9BRL6 282 aaKnown RBP11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 PYGO2Q9BRQ0 406 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 SLC25A2Q9BXI2 301 aa11.18□□□□□ -0.62
RAB3IP-216ENST00000552199 NBR2O15453 112 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 CD99P14209 185 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 S100PP25815 95 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 C10orf113Q5VZT2 155 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 TRGV9Q99603 122 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 TNFRSF19Q9NS68 423 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 TACC2O95359 2948 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 NDUFA3O95167 84 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 TRGC2P03986 189 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 BPIFB3P59826 476 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 FABP9Q0Z7S8 132 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 IGFBPL1Q8WX77 278 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 C22orf15Q8WYQ4 148 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 DMRT1Q9Y5R6 373 aa11.17□□□□□ -0.62
RAB3IP-216ENST00000552199 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 OVOL3O00110 214 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 CNIH1O95406 144 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 OR10J4P0C629 311 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 HOXB4P17483 251 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 LCN2P80188 198 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
RAB3IP-216ENST00000552199 IGHV3-21A0A0B4J1V1 117 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 PPP1R2P9O14990 202 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 CD24P25063 80 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 SSX2Q16385 188 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 MINOS1Q5TGZ0 78 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 CCDC144NLQ6NUI1 221 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 OR2T10Q8NGZ9 312 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 MINOS1-NBL1R4GNA1 71 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 USP24Q9UPU5 2620 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 ELOA3CA0A087WX78 387 aaPredicted RBP11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 IGHV2-70DA0A0C4DH43 119 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 C9JCJ5 164 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 LGALS4P56470 323 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 LMO4P61968 165 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 HES1Q14469 280 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 WNT10AQ9GZT5 417 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 SRD5A3Q9H8P0 318 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms