RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 SLIRPQ9GZT3 109 aaKnown RBP8.43□□□□□ -1.06
PTCH1-222ENST00000551425 NDUFA4L2Q9NRX3 87 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 TMEM140Q9NV12 185 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 DKK2Q9UBU2 259 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 ZNF705FA8MVS1 300 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-222ENST00000551425 RGS5O15539 181 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 HPRT1P00492 218 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 APOA1P02647 267 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 ZNF705DP0CH99 300 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-222ENST00000551425 ZNF705BP0CI00 300 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-222ENST00000551425 NUTF2P61970 127 aaKnown RBP8.42□□□□□ -1.06
PTCH1-222ENST00000551425 MSMO1Q15800 293 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 Q5VSD8 79 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 MCFD2Q8NI22 146 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 SLC25A38Q96DW6 304 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 ATG101Q9BSB4 218 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 TMEM231Q9H6L2 316 aa8.42□□□□□ -1.06
PTCH1-222ENST00000551425 FAM25AB3EWG3 89 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 FAM25CB3EWG5 89 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 FAM25GB3EWG6 89 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 I3L2K1 104 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 TNFSF12O43508 249 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 HPGDSO60760 199 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 HTN3P15516 51 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 BTF3P20290 206 aaKnown RBP8.41□□□□□ -1.06
PTCH1-222ENST00000551425 EMP1P54849 157 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 CNIH2Q6PI25 160 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 STXBP6Q8NFX7 210 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 OR1P1Q8NH06 330 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 FRZBQ92765 325 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 RAB40CQ96S21 281 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 PLEKHA2Q9HB19 425 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
PTCH1-222ENST00000551425 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
PTCH1-222ENST00000551425 CTDSP2O14595 271 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 ELK1P19419 428 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 S100A5P33763 92 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 XGP55808 180 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 CDNFQ49AH0 187 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 FAM222AQ5U5X8 452 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 ZBTB34Q8NCN2 500 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 DMBX1Q8NFW5 382 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 HINT2Q9BX68 163 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 RFNGQ9Y644 331 aa8.4□□□□□ -1.06
PTCH1-222ENST00000551425 TRAV18A0A075B6X5 111 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 A0A1W2PS18 150 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 SULT1C2O00338 296 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 GNG7O60262 68 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 CNPY1Q3B7I2 92 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 TMEM69Q5SWH9 247 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 C15orf40Q8WUR7 153 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 MIXL1Q9H2W2 232 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 COMMD9Q9P000 198 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 RABL2AQ9UBK7 228 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-222ENST00000551425 ELF5Q9UKW6 265 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-222ENST00000551425 RABL2BQ9UNT1 228 aa8.39□□□□□ -1.07
PTCH1-222ENST00000551425 MT-CO2P00403 227 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 NPPCP23582 126 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 TAS2R20P59543 309 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 GNG2P59768 71 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 CATR1Q13166 79 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 HACD4Q5VWC8 232 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 ZNF600Q6ZNG1 722 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 CADM3Q8N126 398 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 SECTM1Q8WVN6 248 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 MISP3Q96FF7 219 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 DIRAS2Q96HU8 199 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 TMEM56Q96MV1 263 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 EXTL2Q9UBQ6 330 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 OR51B2Q9Y5P1 312 aa8.38□□□□□ -1.07
PTCH1-222ENST00000551425 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTCH1-222ENST00000551425 FAT1Q14517 4588 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 TMEM235A6NFC5 223 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 MARCH11A6NNE9 402 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 H3BMM0 161 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 J3QL48 77 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 IGHV3-48P01763 117 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 CRYBB3P26998 211 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 TNFSF8P32971 234 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 P2RY1P47900 373 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 ERVK-16P61578 105 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 PSMG4Q5JS54 123 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 AUNIPQ9H7T9 357 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 PTTG2Q9NZH5 202 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 ANXA10Q9UJ72 324 aa8.37□□□□□ -1.07
PTCH1-222ENST00000551425 A0A1B0GU03 582 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 HELTA6NFD8 242 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 FABP12A6NFH5 140 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 GNRHRP30968 328 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 PRSS3P35030 304 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 CBX5P45973 191 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 NPBWR1P48145 328 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 LINC00299Q6ZSB3 139 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 ZNF114Q8NC26 417 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms