RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 CCDC32Q9BV29 185 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 YIPF3Q9GZM5 350 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 CHST6Q9GZX3 395 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 PBOV1Q9GZY1 135 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 GPR84Q9NQS5 396 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 CISHQ9NSE2 258 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 ACER3Q9NUN7 267 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 CALML5Q9NZT1 146 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 COPZ2Q9P299 210 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 RSL24D1Q9UHA3 163 aaKnown RBP1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 COQ4Q9Y3A0 265 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 PXMP4Q9Y6I8 212 aa1.59□□□□□ -2.15
TSPAN8-205ENST00000550818 NALCNQ8IZF0 1738 aa1.59□□□□□ -2.16
TSPAN8-205ENST00000550818 ARHGEF11O15085 1522 aa1.59□□□□□ -2.16
TSPAN8-205ENST00000550818 EIF4G3O43432 1585 aaKnown RBP1.59□□□□□ -2.16
TSPAN8-205ENST00000550818 ICE1Q9Y2F5 2266 aa1.59□□□□□ -2.16
TSPAN8-205ENST00000550818 KIF15Q9NS87 1388 aa1.59□□□□□ -2.16
TSPAN8-205ENST00000550818 ZNF609O15014 1411 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 DCCP43146 1447 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 SLIT2O94813 1529 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 TMEM269A0A1B0GVZ9 245 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 hADV38S2A0JD32 116 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 TMEM189A5PLL7 270 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 TRAPPC13A5PLN9 417 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 C9JCJ5 164 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 K7ERU9 68 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 COX7A2LO14548 114 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 GGCTO75223 188 aaKnown RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 APOMO95445 188 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 FAM107AO95990 144 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 SERPINE1P05121 402 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 ZNF728P0DKX0 622 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 CCL1P22362 96 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 PEBP1P30086 187 aaKnown RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 RPL27AP46776 148 aaKnown RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 RBP2P50120 134 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 RBM11P57052 281 aaKnown RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 RPL30P62888 115 aaKnown RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 TNFAIP6P98066 277 aaPredicted RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 FAM201AQ5SY85 155 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 DEFB125Q8N687 156 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 Q8NDZ9 215 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 CANT1Q8WVQ1 401 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 MALSU1Q96EH3 234 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 MRPS24Q96EL2 167 aaKnown RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 PPP3R2Q96LZ3 170 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 TXNDC17Q9BRA2 123 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 LXNQ9BS40 222 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 DOHHQ9BU89 302 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 EFCAB11Q9BUY7 163 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 ZNF471Q9BX82 626 aaPredicted RBP1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 PRTFDC1Q9NRG1 225 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 FAIMQ9NVQ4 179 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 LAMTOR3Q9UHA4 124 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 ANAPC10Q9UM13 185 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 ITGB4P16144 1822 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 WDR97A6NE52 1622 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 RTL1A6NKG5 1358 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 THSD7AQ9UPZ6 1657 aa1.58□□□□□ -2.16
TSPAN8-205ENST00000550818 WRNQ14191 1432 aaPredicted RBP eCLIP1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 FGD6Q6ZV73 1430 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 FANCMQ8IYD8 2048 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 UHRF1BP1LA0JNW5 1464 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 TTC37Q6PGP7 1564 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 A0A087WUU8 490 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 A0A0G2JQZ4 141 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 A0A0J9YY10 115 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 A0A1B0GX78 115 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 FAM92AA1XBS5 289 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 OR4C45A6NMZ5 311 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 LY6LH3BQJ8 138 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 H7C1C5 153 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 OVOL1O14753 267 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 NDUFB2O95178 105 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 SCTP09683 121 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 RPS4Y1P22090 263 aaKnown RBP1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 EVI2AP22794 236 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 SRIP30626 198 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 RRAS2P62070 204 aaPredicted RBP1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 LCN6P62502 163 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 MRPS10P82664 201 aaKnown RBP1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 SCGB2B2Q4G0G5 96 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 IBA57Q5T440 356 aaKnown RBP1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 Q6ZS52 159 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 DEFB128Q7Z7B8 93 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 PDZD9Q8IXQ8 264 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 C12orf45Q8N5I9 185 aaPredicted RBP1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 FAM24BQ8N5W8 94 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 ZNF283Q8N7M2 679 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 ST6GALNAC3Q8NDV1 305 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 CLDND2Q8NHS1 167 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 SGMS2Q8NHU3 365 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 SMCR5Q8TEV8 140 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 CT55Q8WUE5 264 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 THEM6Q8WUY1 208 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 ROPN1LQ96C74 230 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 GPR146Q96CH1 333 aa1.57□□□□□ -2.16
TSPAN8-205ENST00000550818 CCDC115Q96NT0 180 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms