RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 CHRDL1Q9BU40 450 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 SIGLEC8Q9NYZ4 499 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 DNAH3Q8TD57 4116 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 IGHV3-48P01763 117 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 CTSGP08311 255 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 IAPPP10997 89 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 KRTAP10-11P60412 298 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 DEFA6Q01524 100 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 FAM106AQ4KMX7 169 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 OR4C12Q96R67 309 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
RAPGEF3-220ENST00000549347 C15orf62A8K5M9 175 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 NUPL2O15504 423 aaKnown RBP13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 GNG7O60262 68 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 CSN3P07498 182 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 SPNP16150 400 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 NPBWR1P48145 328 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 UNQ9165/PRO28630Q6UXU0 137 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 UXS1Q8NBZ7 420 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 TMEM190Q8WZ59 177 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 ZNF414Q96IQ9 312 aa13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 MRPL36Q9P0J6 103 aaKnown RBP13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 ZMAT5Q9UDW3 170 aaKnown RBP13.46□□□□□ -0.25
RAPGEF3-220ENST00000549347 NOTCH3Q9UM47 2321 aa13.46□□□□□ -0.26
RAPGEF3-220ENST00000549347 WRBO00258 174 aa13.45□□□□□ -0.26
RAPGEF3-220ENST00000549347 NDUFA4O00483 81 aa13.45□□□□□ -0.26
RAPGEF3-220ENST00000549347 SLC25A4P12235 298 aa13.45□□□□□ -0.26
RAPGEF3-220ENST00000549347 RELQ04864 619 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-220ENST00000549347 AURKAIP1Q9NWT8 199 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-220ENST00000549347 IGHV3-35A0A0C4DH35 117 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 TMEM213A2RRL7 107 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 C2orf70A6NJV1 201 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 CLN5O75503 358 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 IGLV1-51P01701 117 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 RPP30P78346 268 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 CD69Q07108 199 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 MLANAQ16655 118 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 ETFRF1Q6IPR1 90 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 PRSS54Q6PEW0 395 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 TMEM116Q8NCL8 245 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 C2orf50Q96LR7 162 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 GSKIPQ9P0R6 139 aa13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 RCL1Q9Y2P8 373 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-220ENST00000549347 ZNF320A2RRD8 509 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 C5orf51A6NDU8 294 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 FAM25EA8MYX2 175 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 SSSCA1O60232 199 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 TMEM50AO95807 157 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 SCGB1D2O95969 90 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 IFNA4P05014 189 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 ELLP55199 621 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 RAB11AP62491 216 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 GSG1LQ6UXU4 331 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 ADAMTSL5Q6ZMM2 481 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 UFC1Q9Y3C8 167 aa13.43□□□□□ -0.26
RAPGEF3-220ENST00000549347 C7orf66A4D0T2 115 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 H3BP45 60 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 SCGB2A1O75556 95 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 MBPP02686 304 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 PRB2P02812 416 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 FOLR2P14207 255 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 EDN2P20800 178 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 RND2P52198 227 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 DCTN2Q13561 401 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 HAPLN4Q86UW8 402 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 SMIM8Q96KF7 97 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
RAPGEF3-220ENST00000549347 TRAV30A0A087WSZ9 112 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 PRSS46E5RG02 174 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 IGLC1P0CG04 106 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 CBLN1P23435 193 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 PAX9P55771 341 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 TAS2R30P59541 319 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 IL15RAQ13261 267 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 SPANXN5Q5MJ07 72 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 ZNF600Q6ZNG1 722 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 CACNG8Q8WXS5 425 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 MARC2Q969Z3 335 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 STRAPQ9Y3F4 350 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 MEGF8Q7Z7M0 2845 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 NOTCH1P46531 2555 aa13.41□□□□□ -0.26
RAPGEF3-220ENST00000549347 K7EPK0 472 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 GOSR2O14653 212 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 TSC22D2O75157 780 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 IGKV1-17P01599 117 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 C8orf88P0DMB2 117 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 TM4SF20Q53R12 229 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 OR1S2Q8NGQ3 325 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 OR2K2Q8NGT1 345 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 PSENENQ9NZ42 101 aa13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 ZNF256Q9Y2P7 627 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-220ENST00000549347 K7EMT4 169 aa13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms