RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 OR10C1Q96KK4 312 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 RNF2Q99496 336 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 SOSTQ9BQB4 213 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 RHPN1-AS1Q9BWJ2 59 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 HEYLQ9NQ87 328 aaPredicted RBP10.96□□□□□ -0.65
LINC00661-203ENST00000549131 CSMD3Q7Z407 3707 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 STARD9Q9P2P6 4700 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 TRAV14DV4A0A0A6YYC5 116 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 CEBPZOSA8MTT3 80 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 CHEK1O14757 476 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 ODF3L2Q3SX64 289 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 AARDQ4LEZ3 155 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 ZNF600Q6ZNG1 722 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 TOMM5Q8N4H5 51 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 OR52E5Q8NH55 327 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 GPR146Q96CH1 333 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 KCNIP3Q9Y2W7 256 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 PUS1Q9Y606 427 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC00661-203ENST00000549131 TMEM56-RWDD3S4R434 201 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 V9GYH0 126 aa10.95□□□□□ -0.66
LINC00661-203ENST00000549131 TENM2Q9NT68 2774 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 IGKV3-7A0A075B6H7 116 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 SULT1A3P0DMM9 295 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 SULT1A4P0DMN0 295 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 BMI1P35226 326 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 HTR2BP41595 481 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 TFPI2P48307 235 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 AP3S2P59780 193 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 KLF9Q13886 244 aaPredicted RBP10.94□□□□□ -0.66
LINC00661-203ENST00000549131 TMEM187Q14656 261 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 BSXQ3C1V8 233 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 PVRIGQ6DKI7 326 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 TOMM20LQ6UXN7 152 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 SLC24A4Q8NFF2 622 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 IL22RA2Q969J5 263 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 GALNT14Q96FL9 552 aa10.94□□□□□ -0.66
LINC00661-203ENST00000549131 FNDC4Q9H6D8 234 aaPredicted RBP10.94□□□□□ -0.66
LINC00661-203ENST00000549131 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
LINC00661-203ENST00000549131 CLN5O75503 358 aa10.93□□□□□ -0.66
LINC00661-203ENST00000549131 ANXA3P12429 323 aa10.93□□□□□ -0.66
LINC00661-203ENST00000549131 ZNF79Q15937 498 aa10.93□□□□□ -0.66
LINC00661-203ENST00000549131 TMED4Q7Z7H5 227 aa10.93□□□□□ -0.66
LINC00661-203ENST00000549131 ST8SIA2Q92186 375 aa10.93□□□□□ -0.66
LINC00661-203ENST00000549131 RBM38Q9H0Z9 239 aaKnown RBP10.93□□□□□ -0.66
LINC00661-203ENST00000549131 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
LINC00661-203ENST00000549131 DYNC2H1Q8NCM8 4307 aaKnown RBP10.93□□□□□ -0.66
LINC00661-203ENST00000549131 IGHV3-66A0A0C4DH42 116 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 A0A1B0GU03 582 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 RPS10-NUDT3A0A1W2PQS6 291 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 TMEM50AO95807 157 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 APOC4P55056 127 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 SUPT4H1P63272 117 aaKnown RBP10.92□□□□□ -0.66
LINC00661-203ENST00000549131 SRPXP78539 464 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 TCF24Q7RTU0 167 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 GBGT1Q8N5D6 347 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 OR4X1Q8NH49 305 aa10.92□□□□□ -0.66
LINC00661-203ENST00000549131 A0A0B4J2A0 478 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 NPY1RP25929 384 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 MLANAQ16655 118 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 DEFB135Q30KP9 77 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 C2orf83Q53S99 150 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 NMSQ5H8A3 153 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 SPANXN2Q5MJ10 180 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 LYZL2Q7Z4W2 148 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 LGI3Q8N145 548 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 CACFD1Q9UGQ2 172 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 SHPKQ9UHJ6 478 aa10.91□□□□□ -0.66
LINC00661-203ENST00000549131 APOHP02749 345 aaPredicted RBP10.9□□□□□ -0.66
LINC00661-203ENST00000549131 RPL35AP18077 110 aaKnown RBP10.9□□□□□ -0.66
LINC00661-203ENST00000549131 VAMP1P23763 118 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 CCR6P51684 374 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 RND2P52198 227 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 RPL11P62913 178 aaKnown RBP10.9□□□□□ -0.66
LINC00661-203ENST00000549131 TNFRSF9Q07011 255 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 TIGITQ495A1 244 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 CCDC190Q86UF4 302 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 APRG1Q8IVJ8 170 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
LINC00661-203ENST00000549131 METTL26Q96S19 204 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 TMEM231Q9H6L2 316 aa10.9□□□□□ -0.66
LINC00661-203ENST00000549131 TRAV30A0A087WSZ9 112 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 ZNF701M0R085 212 aaPredicted RBP10.89□□□□□ -0.67
LINC00661-203ENST00000549131 DFFBO76075 338 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 IFNA10P01566 189 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 CD5P06127 495 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 SLC25A4P12235 298 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 PAFAH1B2P68402 229 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 ZNF124Q15973 351 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 TMEM128Q5BJH2 165 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 PRSS54Q6PEW0 395 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 WFDC3Q8IUB2 231 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 OR1S1Q8NH92 325 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 DTD1Q8TEA8 209 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 TMEM170AQ8WVE7 144 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 OVOL2Q9BRP0 275 aa10.89□□□□□ -0.67
LINC00661-203ENST00000549131 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms