RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 NSG2Q9Y328 171 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 TRAV14DV4A0A0A6YYC5 116 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 I3L2K1 104 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 RAB3DO95716 219 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 CD74P04233 296 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 CD3DP04234 171 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 TCTAP57738 103 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 PAFAH1B2P68402 229 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 MEF2DQ14814 521 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 RNASE10Q5GAN6 216 aaKnown RBP9.44□□□□□ -0.9
PTCH1-218ENST00000548945 FAM90A2PQ658T7 463 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 Q6ZNX1 250 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 OR4C16Q8NGL9 310 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 OR6F1Q8NGZ6 308 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 COPZ2Q9P299 210 aa9.44□□□□□ -0.9
PTCH1-218ENST00000548945 HERC2O95714 4834 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 YIF1AO95070 293 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 IFNA4P05014 189 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 HLA-DMAP28067 261 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 S100GP29377 79 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 BTCP35070 178 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 RBMS2Q15434 407 aaKnown RBP9.43□□□□□ -0.9
PTCH1-218ENST00000548945 LPCAT3Q6P1A2 487 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 DUSP18Q8NEJ0 188 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 FXYD6Q9H0Q3 95 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 MCUBQ9NWR8 336 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 AGRNO00468 2067 aa9.43□□□□□ -0.9
PTCH1-218ENST00000548945 TRAV2A0A0B4J234 112 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 DBX1A6NMT0 343 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 DISC1C4P0D8 188 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 DEDDO75618 318 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 DFFBO76075 338 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 PMP2P02689 132 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 ZNF124Q15973 351 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 OR11H2Q8NH07 326 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 SEC22AQ96IW7 307 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 VSIRQ9H7M9 311 aa9.42□□□□□ -0.9
PTCH1-218ENST00000548945 M0QYG6 137 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 GNG7O60262 68 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 MT-CO2P00403 227 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 HRH1P35367 487 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 TFPI2P48307 235 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 NANOS2P60321 138 aaKnown RBP9.41□□□□□ -0.9
PTCH1-218ENST00000548945 FAAP20Q6NZ36 180 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 H2BFWTQ7Z2G1 175 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 ARRDC1Q8N5I2 433 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 OR4D10Q8NGI6 311 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 OR4A16Q8NH70 328 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 PRRT1Q99946 306 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 SCP2D1Q9UJQ7 156 aa9.41□□□□□ -0.9
PTCH1-218ENST00000548945 IGHV3-49A0A0A0MS15 119 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 TCRBP04435 133 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 NPBWR1P48145 328 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 CCR6P51684 374 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 UCP3P55916 312 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
PTCH1-218ENST00000548945 ERHP84090 104 aaKnown RBP9.4□□□□□ -0.9
PTCH1-218ENST00000548945 TMEM187Q14656 261 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 PHLDA2Q53GA4 152 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 GBGT1Q8N5D6 347 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 MARVELD1Q9BSK0 173 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 HRH4Q9H3N8 390 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 FBXL17Q9UF56 701 aa9.4□□□□□ -0.9
PTCH1-218ENST00000548945 IGKV3-7A0A075B6H7 116 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 C11orf94C9JXX5 98 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 INS-IGF2F8WCM5 200 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 NDUFB6O95139 128 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 CA1P00915 261 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-218ENST00000548945 IGKV1-39P01597 117 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 IGKV1D-39P04432 117 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 TSPAN5P62079 268 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 TMEM41BQ5BJD5 291 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 ZNF600Q6ZNG1 722 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 TBC1D26Q86UD7 250 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 ST8SIA2Q92186 375 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 SLC25A21Q9BQT8 299 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-218ENST00000548945 C20orf85Q9H1P6 137 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 MS4A6AQ9H2W1 248 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 TMEM231Q9H6L2 316 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 NUDT15Q9NV35 164 aa9.39□□□□□ -0.91
PTCH1-218ENST00000548945 IGHV3OR16-13A0A075B7E8 117 aa9.38□□□□□ -0.91
PTCH1-218ENST00000548945 IGHV3-74A0A0B4J1X5 117 aa9.38□□□□□ -0.91
PTCH1-218ENST00000548945 A0A1B0GVG6 124 aa9.38□□□□□ -0.91
PTCH1-218ENST00000548945 INMT-MINDY4F8WBC2 141 aa9.38□□□□□ -0.91
PTCH1-218ENST00000548945 DNASE2O00115 360 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-218ENST00000548945 ST8SIA3O43173 380 aa9.38□□□□□ -0.91
PTCH1-218ENST00000548945 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
PTCH1-218ENST00000548945 MRGPRFQ96AM1 343 aa9.38□□□□□ -0.91
PTCH1-218ENST00000548945 PINX1Q96BK5 328 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms