RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PRR27Q6MZM9 219 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 FAM222BQ8WU58 562 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 SGK494Q96LW2 274 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 IGHV1-46P01743 117 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 HLA-DQA1P01909 254 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 GDF5OSQ5U4N7 250 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 RPUSD1Q9UJJ7 312 aaKnown RBP11.47□□□□□ -0.57
RAPGEF3-218ENST00000548919 CNOT1A5YKK6 2376 aaKnown RBP11.46□□□□□ -0.57
RAPGEF3-218ENST00000548919 PSMB11A5LHX3 300 aa11.46□□□□□ -0.57
RAPGEF3-218ENST00000548919 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
RAPGEF3-218ENST00000548919 DEFB123Q8N688 67 aa11.46□□□□□ -0.57
RAPGEF3-218ENST00000548919 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
RAPGEF3-218ENST00000548919 DNAJC4Q9NNZ3 241 aa11.46□□□□□ -0.57
RAPGEF3-218ENST00000548919 AMMECR1Q9Y4X0 333 aaPredicted RBP11.46□□□□□ -0.57
RAPGEF3-218ENST00000548919 DPRXA6NFQ7 191 aa11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 MFAP2P55001 183 aa11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 OR1L8Q8NGR8 309 aa11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 C18orf32Q8TCD1 76 aa11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 COMMD5Q9GZQ3 224 aa11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 RAB9BQ9NP90 201 aa11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 ZNF331Q9NQX6 463 aaPredicted RBP11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 ZZEF1O43149 2961 aa11.46□□□□□ -0.58
RAPGEF3-218ENST00000548919 HYPMO75409 117 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 GNG5P63218 68 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 DIAPH2-AS1Q14236 149 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 OR5B3Q8NH48 314 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 FNDC4Q9H6D8 234 aaPredicted RBP11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 IGLV3-9A0A075B6K5 115 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 CORTO00230 105 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 CCL3L1P16619 93 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 CCL8P80075 99 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 DEFB109BQ30KR1 87 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 ZNF788Q6ZQV5 615 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 FAM169BQ8N8A8 192 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 NPIPB3Q92617 1050 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 BET1LQ9NYM9 111 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 MRPL36Q9P0J6 103 aaKnown RBP11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 GATA4P43694 442 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 PRRX1P54821 245 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 TIMM23BQ5SRD1 257 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 PATE2Q6UY27 113 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 Q6ZN92 141 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 SPACA3Q8IXA5 215 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 PNKDQ8N490 385 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 NUP35Q8NFH5 326 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 C19orf24Q9BVV8 132 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 NCOR1P1Q9H4R4 102 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 NDUFA4L2Q9NRX3 87 aa11.45□□□□□ -0.58
RAPGEF3-218ENST00000548919 DLL1O00548 723 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 IGLC2P0DOY2 106 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 IGLC3P0DOY3 106 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 WT1-ASQ06250 92 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 TNXAQ16473 311 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 IGFL2Q6UWQ7 119 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 ZNF329Q86UD4 541 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 STPG4Q8N801 248 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 TXN2Q99757 166 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 A0A1W2PN81 502 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 REG1AP05451 166 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 BTF3P20290 206 aaKnown RBP11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 CAMPP49913 170 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 RPL8P62917 257 aaKnown RBP11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 COL5A1-AS1Q5SY13 56 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 C10orf113Q5VZT2 155 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
RAPGEF3-218ENST00000548919 MBD3L4A6NDZ8 208 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 MBD3L3A6NE82 208 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 MBD3L5A6NJ08 208 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 GAGE1Q13065 139 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 COX19Q49B96 90 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 RUSC1-AS1Q66K80 236 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 ZNF841Q6ZN19 808 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 MBD3L2Q8NHZ7 208 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 MRPL32Q9BYC8 188 aaKnown RBP11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 CGB1A6NKQ9 187 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 H0YJW9 148 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 PEX7O00628 323 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 ERHP84090 104 aaKnown RBP11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 FAM27E3Q08E93 113 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 MBD6Q96DN6 1003 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 UQCR10Q9UDW1 63 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 RPH3ALQ9UNE2 315 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 FAM215AQ9Y5M1 114 aa11.43□□□□□ -0.58
RAPGEF3-218ENST00000548919 CACNA1HO95180 2353 aa11.42□□□□□ -0.58
RAPGEF3-218ENST00000548919 PKDREJQ9NTG1 2253 aa11.42□□□□□ -0.58
RAPGEF3-218ENST00000548919 VWC2LB2RUY7 222 aa11.42□□□□□ -0.58
RAPGEF3-218ENST00000548919 M0R296 226 aa11.42□□□□□ -0.58
RAPGEF3-218ENST00000548919 ZNF833PQ6ZTB9 187 aa11.42□□□□□ -0.58
RAPGEF3-218ENST00000548919 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms