RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 NPIPB3Q92617 1050 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 FAM167A-AS1Q96KT0 104 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 A0A1W2PRE2 83 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 IGLV1-47P01700 117 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 GRNP28799 593 aaKnown RBP12.5□□□□□ -0.41
BRF1-212ENST00000547562 CENPWQ5EE01 88 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 MORN5Q5VZ52 161 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 SLC25A2Q9BXI2 301 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 IL36BQ9NZH7 164 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 ABCA4P78363 2273 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 TCRBV4S1A1TA0A5B7 111 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 SIAH2O43255 324 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 GNG4P50150 75 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 CNN1P51911 297 aaKnown RBP12.49□□□□□ -0.41
BRF1-212ENST00000547562 PRRX1P54821 245 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 DLX1P56177 255 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 TEX45Q8NA69 505 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 THAP8Q8NA92 274 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 IGKV1D-37A0A075B6S9 117 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 SLC17A3O00476 420 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 FSTL3O95633 263 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 IGHV3-48P01763 117 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 REG1AP05451 166 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 PRDM13Q9H4Q3 707 aa12.49□□□□□ -0.41
BRF1-212ENST00000547562 TRAV9-1A0A075B6T8 112 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 TRAV5A0A0B4J249 113 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 IGLC7A0M8Q6 106 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 COX7A2P2O60397 106 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 SUMO1P63165 101 aaKnown RBP12.48□□□□□ -0.41
BRF1-212ENST00000547562 ZNF90Q03938 601 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 MRPL36Q9P0J6 103 aaKnown RBP12.48□□□□□ -0.41
BRF1-212ENST00000547562 IGF2RP11717 2491 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 RD3LP0DJH9 198 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 ERVFC1-1P60608 527 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
BRF1-212ENST00000547562 UBE2L3P68036 154 aaKnown RBP12.48□□□□□ -0.41
BRF1-212ENST00000547562 OR5I1Q13606 314 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 MMD2Q8IY49 270 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 OR1L4Q8NGR5 311 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 CLEC7AQ9BXN2 247 aa12.48□□□□□ -0.41
BRF1-212ENST00000547562 BUB1B-PAK6H3BSN5 160 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 CCL21O00585 134 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 CRYGBP07316 175 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 SELENOTP62341 195 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 PRB3Q04118 309 aaPredicted RBP12.47□□□□□ -0.41
BRF1-212ENST00000547562 ZNF672Q499Z4 452 aaPredicted RBP12.47□□□□□ -0.41
BRF1-212ENST00000547562 C10orf113Q5VZT2 155 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
BRF1-212ENST00000547562 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 IGHV1-3A0A0C4DH29 117 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 CNTFRP26992 372 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 BPIFB3P59826 476 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 PATE2Q6UY27 113 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 BEND2Q8NDZ0 799 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 INSIG2Q9Y5U4 225 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 V9GYV3 84 aa12.47□□□□□ -0.41
BRF1-212ENST00000547562 LRBAP50851 2863 aa12.46□□□□□ -0.41
BRF1-212ENST00000547562 PPIAL4CA0A0B4J2A2 164 aa12.46□□□□□ -0.41
BRF1-212ENST00000547562 RBP4P02753 201 aa12.46□□□□□ -0.41
BRF1-212ENST00000547562 PPIAL4GP0DN37 164 aa12.46□□□□□ -0.41
BRF1-212ENST00000547562 RPL27AP46776 148 aaKnown RBP12.46□□□□□ -0.41
BRF1-212ENST00000547562 TNXAQ16473 311 aa12.46□□□□□ -0.41
BRF1-212ENST00000547562 RPEL1Q2QD12 228 aa12.46□□□□□ -0.41
BRF1-212ENST00000547562 ETFRF1Q6IPR1 90 aa12.46□□□□□ -0.41
BRF1-212ENST00000547562 CRYGCP07315 174 aa12.46□□□□□ -0.42
BRF1-212ENST00000547562 UCNP55089 124 aa12.46□□□□□ -0.42
BRF1-212ENST00000547562 LGALS4P56470 323 aa12.46□□□□□ -0.42
BRF1-212ENST00000547562 JOSD1Q15040 202 aaPredicted RBP12.46□□□□□ -0.42
BRF1-212ENST00000547562 TIGITQ495A1 244 aa12.46□□□□□ -0.42
BRF1-212ENST00000547562 HCP5Q6MZN7 132 aa12.46□□□□□ -0.42
BRF1-212ENST00000547562 OR5R1Q8NH85 324 aa12.46□□□□□ -0.42
BRF1-212ENST00000547562 SIGLEC9Q9Y336 463 aa12.46□□□□□ -0.42
BRF1-212ENST00000547562 MFAP2P55001 183 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 PAXXQ9BUH6 204 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 NBASA2RRP1 2371 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 PYYP10082 97 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 ADMP35318 185 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 COMPP49747 757 aaPredicted RBP12.45□□□□□ -0.42
BRF1-212ENST00000547562 SSX2Q16385 188 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 ST6GALNAC3Q8NDV1 305 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 RAXQ9Y2V3 346 aa12.45□□□□□ -0.42
BRF1-212ENST00000547562 C22orf46C9J442 243 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 GCGP01275 180 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 GZMBP10144 247 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 FOSL1P15407 271 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 COX7A1P24310 79 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 RUSC1-AS1Q66K80 236 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 GBGT1Q8N5D6 347 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 TMEM18Q96B42 140 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 TNFRSF19Q9NS68 423 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 DCHS2Q6V1P9 2916 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 RELNP78509 3460 aa12.44□□□□□ -0.42
BRF1-212ENST00000547562 IGLV2-8P01709 118 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms