RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 TTC9CQ8N5M4 171 aa8.65□□□□□ -1.02
SSH1-203ENST00000546433 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
SSH1-203ENST00000546433 DEPPQ9NTK1 212 aa8.65□□□□□ -1.02
SSH1-203ENST00000546433 F11RQ9Y624 299 aaKnown RBP8.65□□□□□ -1.02
SSH1-203ENST00000546433 CNOT1A5YKK6 2376 aaKnown RBP8.65□□□□□ -1.02
SSH1-203ENST00000546433 PIKFYVEQ9Y2I7 2098 aa8.65□□□□□ -1.02
SSH1-203ENST00000546433 NYNRINQ9P2P1 1898 aaKnown RBP8.65□□□□□ -1.02
SSH1-203ENST00000546433 SCGB1A1P11684 91 aa8.65□□□□□ -1.02
SSH1-203ENST00000546433 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
SSH1-203ENST00000546433 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.03
SSH1-203ENST00000546433 PAQR4Q8N4S7 273 aaPredicted RBP8.65□□□□□ -1.03
SSH1-203ENST00000546433 TMEM158Q8WZ71 300 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 IGHV1-18A0A0C4DH31 117 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 LEMD1Q68G75 181 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 CLEC19AQ6UXS0 136 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 IMMP2LQ96T52 175 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 TMEM160Q9NX00 188 aa8.65□□□□□ -1.03
SSH1-203ENST00000546433 M0R381 172 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 MTURNQ8N3F0 131 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 TMEM170AQ8WVE7 144 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 RNF114Q9Y508 228 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 IGHV3-35A0A0C4DH35 117 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 TIMM23O14925 209 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 HOXA5P20719 270 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 DUTP33316 252 aaKnown RBP8.64□□□□□ -1.03
SSH1-203ENST00000546433 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
SSH1-203ENST00000546433 DEFB113Q30KQ7 82 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 ZNF600Q6ZNG1 722 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 FABP5P3A8MUU1 101 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 C9JCJ5 164 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 GAS1P54826 345 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 LOC102724200A0A096LPH7 203 aaPredicted RBP8.64□□□□□ -1.03
SSH1-203ENST00000546433 PRR32B1ATL7 298 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 DNAL4O96015 105 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 CACNG7P62955 275 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 TMEM170BQ5T4T1 132 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 DUX3Q96PT4 197 aa8.64□□□□□ -1.03
SSH1-203ENST00000546433 TDRD6O60522 2096 aaKnown RBP8.64□□□□□ -1.03
SSH1-203ENST00000546433 E9PQ18 207 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 DUSP14O95147 198 aaKnown RBP8.63□□□□□ -1.03
SSH1-203ENST00000546433 PLA2G2AP14555 144 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 ZNF257Q9Y2Q1 563 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 CHD5Q8TDI0 1954 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 RNF125Q96EQ8 232 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 A0A0A6YYD4 124 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 J3QLI3 93 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 CCL3L1P16619 93 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 GFI1Q99684 422 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 EPDR1Q9UM22 224 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 NABP1Q96AH0 204 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
SSH1-203ENST00000546433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.62□□□□□ -1.03
SSH1-203ENST00000546433 MYOFQ9NZM1 2061 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 BRWD1Q9NSI6 2320 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 DOCK4Q8N1I0 1966 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 IGHV3OR16-13A0A075B7E8 117 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 IGHV3-74A0A0B4J1X5 117 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 IGKV3-20P01619 116 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 PPBPP02775 128 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 GGNQ86UU5 652 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 SEC16AO15027 2179 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 LINC01549A6NIU2 74 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 LHFPL1Q86WI0 220 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 MRAP2Q96G30 205 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 COLCA1Q6ZS62 124 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 FOXC2Q99958 501 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 ZNF319Q9P2F9 582 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 IGHV3-66A0A0C4DH42 116 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 A0A1B0GW64 132 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 PINLYPA6NC86 204 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 SRRM5B3KS81 715 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 RNF5Q99942 180 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 TMEM242Q9NWH2 141 aa8.62□□□□□ -1.03
SSH1-203ENST00000546433 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 OR9G9P0C7N8 305 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 CTAG1AP78358 180 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 PRDM13Q9H4Q3 707 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 TRAV8-6A0A0B4J262 113 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 RAMP3O60896 148 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 IGHV1-46P01743 117 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 RNASE4P34096 147 aaKnown RBP8.61□□□□□ -1.03
SSH1-203ENST00000546433 OR10J3Q5JRS4 329 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 ATP5L2Q7Z4Y8 100 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 TRAV21A0A0B4J279 112 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 OOSP1A8MZH6 123 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 LDLRAD4O15165 306 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 GCSAMLQ5JQS6 135 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 GNB1LQ9BYB4 327 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 S4R3C0 116 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 H0YIZ8 118 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 LILRA1O75019 489 aa8.61□□□□□ -1.03
SSH1-203ENST00000546433 ITLN2Q8WWU7 325 aaPredicted RBP8.61□□□□□ -1.03
SSH1-203ENST00000546433 VCX2Q9H322 139 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms