RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ERASQ7Z444 233 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 OR1L8Q8NGR8 309 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 PAXXQ9BUH6 204 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 SPRY4Q9C004 299 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
SRP54-202ENST00000546080 COX7A2P2O60397 106 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 RNASE2P10153 161 aaKnown RBP11.55□□□□□ -0.56
SRP54-202ENST00000546080 ACP1P24666 158 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 CA7P43166 264 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 RNFT1Q5M7Z0 435 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 MBNL2Q5VZF2 373 aaKnown RBP11.55□□□□□ -0.56
SRP54-202ENST00000546080 CNEP1R1Q8N9A8 125 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 URB1-AS1Q96HZ7 61 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 ZNF714Q96N38 554 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
SRP54-202ENST00000546080 WASHC3Q9Y3C0 194 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 FRYQ5TBA9 3013 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 PSMB11A5LHX3 300 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 CORTO00230 105 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 RHOGP84095 191 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
SRP54-202ENST00000546080 SH2D7A6NKC9 451 aaPredicted RBP11.54□□□□□ -0.56
SRP54-202ENST00000546080 CRXO43186 299 aaPredicted RBP11.54□□□□□ -0.56
SRP54-202ENST00000546080 PPBPP02775 128 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 CGB3P0DN86 165 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 CGB7P0DN87 165 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 HBBP68871 147 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 C1RLQ9NZP8 487 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 KBTBD11-OT1A0A1B0GTJ5 212 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 hDV102S1A0JD36 115 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 SYS1-DBNDD2H3BUS1 97 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 M0QZ24 198 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 TAX1BP3O14907 124 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 NUDT3O95989 172 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 PRR31Q5SQ13 230 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 PEAR1Q5VY43 1037 aaPredicted RBP11.54□□□□□ -0.56
SRP54-202ENST00000546080 C10orf113Q5VZT2 155 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 SLC25A34Q6PIV7 304 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 OR1L4Q8NGR5 311 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 RNF24Q9Y225 148 aa11.54□□□□□ -0.56
SRP54-202ENST00000546080 COL27A1Q8IZC6 1860 aaPredicted RBP11.53□□□□□ -0.56
SRP54-202ENST00000546080 IGHV1-24A0A0C4DH33 117 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 HSBP1L1C9JCN9 74 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 DLL1O00548 723 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 LEPROTL1O95214 131 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 BVES-AS1Q5T3Y7 98 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 SSX8Q7RTT4 187 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 TCF24Q7RTU0 167 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 OR10W1Q8NGF6 305 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 CACNG8Q8WXS5 425 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 CHCHD1Q96BP2 118 aaKnown RBP11.53□□□□□ -0.56
SRP54-202ENST00000546080 C7orf69Q9H7B7 122 aa11.53□□□□□ -0.56
SRP54-202ENST00000546080 SRRM4A7MD48 611 aaKnown RBP11.52□□□□□ -0.56
SRP54-202ENST00000546080 VWC2LB2RUY7 222 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 IGKV1-16P04430 117 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 FOXA3P55318 350 aaPredicted RBP11.52□□□□□ -0.56
SRP54-202ENST00000546080 BPIFB3P59826 476 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 RPS20P60866 119 aaKnown RBP11.52□□□□□ -0.56
SRP54-202ENST00000546080 GNG5P63218 68 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 MOGAT3Q86VF5 341 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 VPS25Q9BRG1 176 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 CELSR3Q9NYQ7 3312 aa11.52□□□□□ -0.56
SRP54-202ENST00000546080 TOX4O94842 621 aa11.52□□□□□ -0.57
SRP54-202ENST00000546080 SAA1P0DJI8 122 aaPredicted RBP11.52□□□□□ -0.57
SRP54-202ENST00000546080 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
SRP54-202ENST00000546080 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.57
SRP54-202ENST00000546080 ZNF841Q6ZN19 808 aa11.52□□□□□ -0.57
SRP54-202ENST00000546080 LINC00173Q6ZV60 143 aa11.52□□□□□ -0.57
SRP54-202ENST00000546080 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
SRP54-202ENST00000546080 C1orf162Q8NEQ5 155 aaPredicted RBP11.52□□□□□ -0.57
SRP54-202ENST00000546080 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
SRP54-202ENST00000546080 MUC21A0A0G2JKD1 596 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 MUC21A0A140T8X8 626 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 CBY3A6NI87 242 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 CT45A6P0DMU7 189 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 CT45A5P0DMU8 189 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 CT45A7P0DMV0 189 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 PSG1P11464 419 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 CFHR2P36980 270 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 REG1BP48304 166 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 SSBP2P81877 361 aaPredicted RBP11.51□□□□□ -0.57
SRP54-202ENST00000546080 ERHP84090 104 aaKnown RBP11.51□□□□□ -0.57
SRP54-202ENST00000546080 MUC21Q5SSG8 566 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 RPP21Q9H633 154 aaKnown RBP11.51□□□□□ -0.57
SRP54-202ENST00000546080 IGHV1-18A0A0C4DH31 117 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 SLC25A5P05141 298 aaKnown RBP11.51□□□□□ -0.57
SRP54-202ENST00000546080 VWA1Q6PCB0 445 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 SMIM15Q7Z3B0 74 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 NCOR1P1Q9H4R4 102 aa11.51□□□□□ -0.57
SRP54-202ENST00000546080 ZNF430Q9H8G1 570 aaPredicted RBP11.51□□□□□ -0.57
SRP54-202ENST00000546080 CD24P25063 80 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 OCIAD2Q56VL3 154 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 SPRNQ5BIV9 151 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 TMEM164Q5U3C3 297 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 SMIM12Q96EX1 92 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms