RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ZNF436Q9C0F3 470 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-217ENST00000545738 OPRK1P41145 380 aa12.52□□□□□ -0.41
LIMS2-217ENST00000545738 ARL16Q0P5N6 197 aa12.52□□□□□ -0.41
LIMS2-217ENST00000545738 TMEM14EPQ6UXP3 125 aa12.52□□□□□ -0.41
LIMS2-217ENST00000545738 VN1R17PQ8TDU5 208 aa12.52□□□□□ -0.41
LIMS2-217ENST00000545738 RAB40CQ96S21 281 aa12.52□□□□□ -0.41
LIMS2-217ENST00000545738 THYN1Q9P016 225 aa12.52□□□□□ -0.41
LIMS2-217ENST00000545738 CCL24O00175 119 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 MPC2O95563 127 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 CLEC3BP05452 202 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 GPR183P32249 361 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 ADMP35318 185 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 SUB1P53999 127 aaKnown RBP eCLIP12.51□□□□□ -0.41
LIMS2-217ENST00000545738 SLURP1P55000 103 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 EEF1AKMT3Q96AZ1 226 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 CHRDL1Q9BU40 450 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 C21orf62Q9NYP8 219 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 FAM24AA6NFZ4 105 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 METTL15P1P0C7V9 234 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 UBAC2Q8NBM4 344 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 CXorf58Q96LI9 332 aa12.51□□□□□ -0.41
LIMS2-217ENST00000545738 PEF1Q9UBV8 284 aaKnown RBP12.51□□□□□ -0.41
LIMS2-217ENST00000545738 LOC105371267A0A1B0GV96 52 aa12.5□□□□□ -0.41
LIMS2-217ENST00000545738 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
LIMS2-217ENST00000545738 TSC22D2O75157 780 aa12.5□□□□□ -0.41
LIMS2-217ENST00000545738 IFNA4P05014 189 aa12.5□□□□□ -0.41
LIMS2-217ENST00000545738 TAS2R30P59541 319 aa12.5□□□□□ -0.41
LIMS2-217ENST00000545738 CYCSP99999 105 aaKnown RBP12.5□□□□□ -0.41
LIMS2-217ENST00000545738 CD69Q07108 199 aa12.5□□□□□ -0.41
LIMS2-217ENST00000545738 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
LIMS2-217ENST00000545738 STRAPQ9Y3F4 350 aaKnown RBP12.5□□□□□ -0.41
LIMS2-217ENST00000545738 TRBV7-1A0A0A6YYK4 115 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 IGHV3-35A0A0C4DH35 117 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 CORTO00230 105 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 HSPB1P04792 205 aaKnown RBP12.49□□□□□ -0.41
LIMS2-217ENST00000545738 OR8U8P0C7N1 319 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-217ENST00000545738 ZNF616Q08AN1 781 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 LINC00482Q8N8I6 264 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 BSCL2Q96G97 398 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-217ENST00000545738 LYRM2Q9NU23 88 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-217ENST00000545738 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 DNAH3Q8TD57 4116 aa12.49□□□□□ -0.41
LIMS2-217ENST00000545738 SMLR1H3BR10 107 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 CYB5BO43169 146 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 CTSGP08311 255 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 GIPP09681 153 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-217ENST00000545738 CAV2P51636 162 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 OR8G2PQ6IF36 304 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 SLC16A13Q7RTY0 426 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-217ENST00000545738 IGKV1OR2-108A0A075B7D4 117 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 LINC01619G3V211 115 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 M0QZ24 198 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 CST7O76096 145 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-217ENST00000545738 ARL3P36405 182 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 RND2P52198 227 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 GAMTQ14353 236 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 ACSM6Q6P461 480 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 ACOT7LQ6ZUV0 252 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 TMEM252Q8N6L7 170 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 OR4F17Q8NGA8 305 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 OR4F4Q96R69 305 aa12.48□□□□□ -0.41
LIMS2-217ENST00000545738 RANGRFQ9HD47 186 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-217ENST00000545738 L7N2F9 121 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 TGOLN2O43493 480 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 OR2C1O95371 312 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 LYL1P12980 280 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 EDN2P20800 178 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 MYCNOSP40205 109 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 MFAP4P55083 255 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 ATP5IP56385 69 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-217ENST00000545738 VAMP2P63027 116 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 Q56UQ5 140 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 OR4X1Q8NH49 305 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 NBEAL1Q6ZS30 2694 aa12.47□□□□□ -0.41
LIMS2-217ENST00000545738 IGKV1D-37A0A075B6S9 117 aa12.46□□□□□ -0.41
LIMS2-217ENST00000545738 IGKV1-17P01599 117 aa12.46□□□□□ -0.41
LIMS2-217ENST00000545738 RAB11AP62491 216 aa12.46□□□□□ -0.41
LIMS2-217ENST00000545738 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.41
LIMS2-217ENST00000545738 DCUN1D4Q92564 292 aa12.46□□□□□ -0.41
LIMS2-217ENST00000545738 ACY3Q96HD9 319 aa12.46□□□□□ -0.41
LIMS2-217ENST00000545738 CLN5O75503 358 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 LY86O95711 162 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 PF4P02776 101 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 RPP30P78346 268 aaKnown RBP12.45□□□□□ -0.42
LIMS2-217ENST00000545738 NHLH2Q02577 135 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
LIMS2-217ENST00000545738 NOXA1Q86UR1 476 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 SLC51BQ86UW2 128 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 TMEM217Q8N7C4 229 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 OR2T35Q8NGX2 323 aa12.45□□□□□ -0.42
LIMS2-217ENST00000545738 IGHV3OR16-8A0A075B7F1 116 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms