RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NUTF2P61970 127 aaKnown RBP10.38□□□□□ -0.75
COL4A6-209ENST00000545689 TSKUQ8WUA8 353 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 MOB4Q9Y3A3 225 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 MDS2Q8NDY4 140 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 ARID1AO14497 2285 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 LEPP41159 167 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 GGTLC1Q9BX51 225 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 ATXN7O15265 892 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-209ENST00000545689 SCGB3A1Q96QR1 104 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 RNASE7Q9H1E1 156 aaKnown RBP10.38□□□□□ -0.75
COL4A6-209ENST00000545689 FNDC10F2Z333 226 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 FAM71F2Q6NXP2 309 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 TMEM160Q9NX00 188 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 VWA8A3KMH1 1905 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 IGHV3-23P01764 117 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 THBDP07204 575 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 MTURNQ8N3F0 131 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 OCC1Q8TAD7 63 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 CLEC19AQ6UXS0 136 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 LINC01549A6NIU2 74 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 Q6P435 159 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 MYOD1P15172 320 aa10.37□□□□□ -0.75
COL4A6-209ENST00000545689 Q0VFX4 171 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 FOXF2Q12947 444 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 KLK15Q9H2R5 256 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 TNFRSF18Q9Y5U5 241 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 SLC25A15Q9Y619 301 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 BMPERQ8N8U9 685 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 PSG8Q9UQ74 426 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 SCN8AQ9UQD0 1980 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
COL4A6-209ENST00000545689 ANAPC10Q9UM13 185 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-209ENST00000545689 IGKV1-5P01602 117 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 MESP1Q9BRJ9 268 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 C2orf88Q9BSF0 95 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 GNG5P63218 68 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 TMEM167AQ8TBQ9 72 aa10.36□□□□□ -0.75
COL4A6-209ENST00000545689 ASCC3Q8N3C0 2202 aaKnown RBP10.36□□□□□ -0.75
COL4A6-209ENST00000545689 FNDC1Q4ZHG4 1894 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-209ENST00000545689 OR5AN1Q8NGI8 311 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 FOXC2Q99958 501 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 TRAV9-2A0A087WT02 112 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-209ENST00000545689 M0R381 172 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 OR4X2Q8NGF9 303 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 TRGV9Q99603 122 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 F2Z2F3 143 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 H3BRM9 83 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 IGKV3-15P01624 115 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 IGHG3P01860 377 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 SCN2AQ99250 2005 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-209ENST00000545689 H7C2G1 150 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 ITGB1BP1O14713 200 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 HIST3H2BBQ8N257 126 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 HBDP02042 147 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 SEC16AO15027 2179 aa10.35□□□□□ -0.75
COL4A6-209ENST00000545689 IGHV3-35A0A0C4DH35 117 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 PRSS2P07478 247 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 MEIG1Q5JSS6 88 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 IGHV3OR16-12A0A075B7B8 117 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 CD177Q8N6Q3 437 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 VCX2Q9H322 139 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 IGHV3OR16-10A0A075B7F0 116 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 DUSP14O95147 198 aaKnown RBP10.34□□□□□ -0.75
COL4A6-209ENST00000545689 PYYP10082 97 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 SLC25A48Q6ZT89 311 aaKnown RBP10.34□□□□□ -0.75
COL4A6-209ENST00000545689 C14orf144Q96I85 54 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 KLHDC3Q9BQ90 382 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 MBD3L4A6NDZ8 208 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-209ENST00000545689 MBD3L3A6NE82 208 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-209ENST00000545689 MBD3L5A6NJ08 208 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-209ENST00000545689 LINC00614P0C842 121 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 FOXG1P55316 489 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-209ENST00000545689 MBD3L2Q8NHZ7 208 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-209ENST00000545689 PSPNO60542 156 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
COL4A6-209ENST00000545689 MINOS1Q5TGZ0 78 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 MGST2Q99735 147 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 MINOS1-NBL1R4GNA1 71 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 S4R3C0 116 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 IGHV2-26A0A0B4J1V2 119 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 OVOL1O14753 267 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 C18orf15Q96N68 181 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 TMEM178BH3BS89 294 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 IGHV1-8P0DP01 117 aa10.33□□□□□ -0.76
COL4A6-209ENST00000545689 MBNL3Q9NUK0 354 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms