RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SDHCQ99643 169 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-216ENST00000545663 A0A1B0GW64 132 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 UPK1BO75841 260 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 XGP55808 180 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 DEFA1P59665 94 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 DEFA3P59666 94 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 VMA21Q3ZAQ7 101 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 ZNF818PQ6ZRF7 136 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 SLC25A42Q86VD7 318 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 TCTEX1D2Q8WW35 142 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 TMEM190Q8WZ59 177 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 ZNF436Q9C0F3 470 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 FXYD6Q9H0Q3 95 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 COPZ2Q9P299 210 aa10.98□□□□□ -0.65
CLSTN3-216ENST00000545663 ZNF705EA8MWA4 302 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 CREBL2O60519 120 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 PGLYRP1O75594 196 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 ATG12O94817 140 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 IGLV2-14P01704 120 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 IL6RP08887 468 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 AREGP15514 252 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 LEMD1Q68G75 181 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 GBGT1Q8N5D6 347 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 RNF2Q99496 336 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 SLC2A9Q9NRM0 540 aa10.97□□□□□ -0.65
CLSTN3-216ENST00000545663 NPIPB5A8MRT5 1133 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 LYRM1O43325 122 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 ACTL6BO94805 426 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 HRASP01112 189 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 REG1AP05451 166 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 F2RP25116 425 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 FAAP20Q6NZ36 180 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 OR13C8Q8NGS7 320 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 VSTM2AQ8TAG5 236 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 FRZBQ92765 325 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 CLEC5AQ9NY25 188 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 GPR132Q9UNW8 380 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 KCNIP3Q9Y2W7 256 aa10.96□□□□□ -0.65
CLSTN3-216ENST00000545663 RNF213Q63HN8 5207 aa10.96□□□□□ -0.66
CLSTN3-216ENST00000545663 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 NBDYA0A0U1RRE5 68 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 FCGR3BO75015 233 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 CRYZL1O95825 349 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 HPRT1P00492 218 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 SAA1P0DJI8 122 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 PIGPP57054 158 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 TAS2R31P59538 309 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 UBE2MP61081 183 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 ASAH1Q13510 395 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 SPAG16Q8N0X2 631 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 CADM3Q8N126 398 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 ZNF502Q8TBZ5 544 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 MARCH1Q8TCQ1 289 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 FYTTD1Q96QD9 318 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 PLEKHA2Q9HB19 425 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 COMMD9Q9P000 198 aa10.95□□□□□ -0.66
CLSTN3-216ENST00000545663 TEX13DA0A0J9YY54 714 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 LINC00473A8K010 186 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 F8W735 103 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 TNFSF12O43508 249 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 RLN1P04808 185 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 SERPINE2P07093 398 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 CRYGCP07315 174 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 ANXA3P12429 323 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 PHLDA2Q53GA4 152 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 TBC1D26Q86UD7 250 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 OR51H1Q8NH63 302 aa10.94□□□□□ -0.66
CLSTN3-216ENST00000545663 IGLV11-55A0A075B6I3 123 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 IGHV3-49A0A0A0MS15 119 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 LINC00854A0A1B0GVQ3 168 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 NDUFB6O95139 128 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 NQO2P16083 231 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 C4BPBP20851 252 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 ERVK-16P61578 105 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 RPL30P62888 115 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 SRPXP78539 464 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 DHODHQ02127 395 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 TMEM128Q5BJH2 165 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
CLSTN3-216ENST00000545663 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 FAM240BA0A1B0GVZ2 78 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 PLA2G10O15496 165 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 FGF2P09038 288 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 NPY1RP25929 384 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 DEFB131AP59861 70 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 KLK9Q2XQG4 91 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 MMD2Q8IY49 270 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 FAM24BQ8N5W8 94 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 ZNF503Q96F45 646 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 RTBDNQ9BSG5 229 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 SMPXQ9UHP9 88 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 KLK9Q9UKQ9 250 aa10.92□□□□□ -0.66
CLSTN3-216ENST00000545663 TBC1D24Q9ULP9 559 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms