RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 Q6ZWC4 215 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 C1QTNF5Q9BXJ0 243 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 FNDC10F2Z333 226 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 LILRA1O75019 489 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 FOXH1O75593 365 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 CD3EP07766 207 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 PRB4P10163 310 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-216ENST00000545170 RNF186Q9NXI6 227 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 NUP98P52948 1817 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 TRAV26-1A0A087WT03 109 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 TRAV41A0A0B4J266 112 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 LEPROTO15243 131 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 ZC2HC1BQ5TFG8 222 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 LINC01465Q8N7H1 131 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 BRK1Q8WUW1 75 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 R3HDMLQ9H3Y0 253 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 RFNGQ9Y644 331 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 WISP3O95389 354 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-216ENST00000545170 IGHV2-5P01817 119 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 CRYBA2P53672 197 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 Q6ZVH6 145 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 CEND1Q8N111 149 aa7.23□□□□□ -1.25
ATXN3-216ENST00000545170 DDX60LQ5H9U9 1706 aaKnown RBP7.23□□□□□ -1.25
ATXN3-216ENST00000545170 SPTY2D1-AS1A0A0U1RR47 76 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 PAX4O43316 350 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 CCL3P10147 92 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 TMEM52Q8NDY8 209 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 LIFP15018 202 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 SYNJ2BPP57105 145 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 HERV-K104P63124 156 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 LINC01590Q5TEZ4 76 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 CDCP2Q5VXM1 449 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 ASCL2Q99929 193 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 ZNF319Q9P2F9 582 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 FOCADQ5VW36 1801 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 SCN11AQ9UI33 1791 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 C9orf172C9J069 976 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 SAP30O75446 220 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 INAFM2P0DMQ5 153 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 FAM106AQ4KMX7 169 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 HAPLN4Q86UW8 402 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 TMEM158Q8WZ71 300 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 Q0VG73 95 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 SPAG17Q6Q759 2223 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 AHDC1Q5TGY3 1603 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-216ENST00000545170 TRAV40A0A0B4J280 105 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 MORN5Q5VZ52 161 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 ZNF721Q8TF20 911 aa7.22□□□□□ -1.25
ATXN3-216ENST00000545170 F2Z2F3 143 aa7.21□□□□□ -1.25
ATXN3-216ENST00000545170 CDK2AP2O75956 126 aa7.21□□□□□ -1.25
ATXN3-216ENST00000545170 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.25
ATXN3-216ENST00000545170 CELA2BP08218 269 aaPredicted RBP7.21□□□□□ -1.25
ATXN3-216ENST00000545170 CD7P09564 240 aa7.21□□□□□ -1.25
ATXN3-216ENST00000545170 PHF7Q9BWX1 381 aaPredicted RBP7.21□□□□□ -1.25
ATXN3-216ENST00000545170 RGPD8O14715 1765 aaPredicted RBP7.21□□□□□ -1.25
ATXN3-216ENST00000545170 TRAV1-1A0A0B4J248 108 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 LINC01549A6NIU2 74 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 LMO7DNF2Z398 122 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 RS1O15537 224 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 APOBEC3AP31941 199 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-216ENST00000545170 TCTEX1D4Q5JR98 221 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 SLC25A48Q6ZT89 311 aaKnown RBP7.21□□□□□ -1.26
ATXN3-216ENST00000545170 BHLHA9Q7RTU4 235 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 COX14Q96I36 57 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 JPT2Q9H910 190 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 CXorf51AA0A1B0GTR3 108 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 IGHMP01871 453 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 SRFP11831 508 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 ITLN1Q8WWA0 313 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 MESP1Q9BRJ9 268 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 TMEM243Q9BU79 118 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 PTGDSP41222 190 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 CCL8P80075 99 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 AMN1Q8IY45 258 aa7.21□□□□□ -1.26
ATXN3-216ENST00000545170 TRAV17A0A0B4J275 112 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 COX8AP10176 69 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 COL9A1P20849 921 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 DUX4L9Q6RFH8 374 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-216ENST00000545170 LYZL1Q6UWQ5 148 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 GLMPQ8WWB7 406 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 TCRAP04437 139 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 FGF6P10767 208 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 IGLL1P15814 213 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 SPATA31B1PQ5VZV4 182 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 SCARF2Q96GP6 870 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-216ENST00000545170 TRAV12-1A0A0B4J245 112 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 SMKR1H3BMG3 65 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 IL11RAQ14626 422 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 GAS1P54826 345 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 HGFACQ04756 655 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 RSPO4Q2I0M5 234 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-216ENST00000545170 TMEM196Q5HYL7 178 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 CACNG8Q8WXS5 425 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
ATXN3-216ENST00000545170 DUSP15Q9H1R2 295 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-216ENST00000545170 PEBP1P30086 187 aaKnown RBP7.19□□□□□ -1.26
ATXN3-216ENST00000545170 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms