RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 NECAP1Q8NC96 275 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 OR5T1Q8NG75 326 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 SCGB1C1Q8TD33 95 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 MISP3Q96FF7 219 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 CXorf58Q96LI9 332 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 DUX5Q96PT3 197 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 ATP6V0BQ99437 205 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 ZNF471Q9BX82 626 aaPredicted RBP7.46□□□□□ -1.22
YBX3-215ENST00000544504 PARD6GQ9BYG4 376 aaPredicted RBP7.46□□□□□ -1.22
YBX3-215ENST00000544504 NPVFQ9HCQ7 196 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 KCNIP2Q9NS61 270 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 ZNF355PQ9NSJ1 428 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 FBXO7Q9Y3I1 522 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 PLXNB1O43157 2135 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 IGLV11-55A0A075B6I3 123 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 A0A0G2JLM5 398 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 NDUFA7O95182 113 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 TPT1P13693 172 aaKnown RBP7.45□□□□□ -1.22
YBX3-215ENST00000544504 CLINT1Q14677 625 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 VWC2Q2TAL6 325 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 SLC16A13Q7RTY0 426 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 ZNF709Q8N972 641 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 UBAC2Q8NBM4 344 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 OR4F5Q8NH21 305 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 VN1R17PQ8TDU5 208 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 TMEM170AQ8WVE7 144 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 GNPNAT1Q96EK6 184 aaPredicted RBP7.45□□□□□ -1.22
YBX3-215ENST00000544504 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 TXN2Q99757 166 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 C16orf95Q9H693 158 aa7.45□□□□□ -1.22
YBX3-215ENST00000544504 TRAV30A0A087WSZ9 112 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 TRBV9A0A0B4J1U6 114 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 A0A1B0GUS0 222 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 SMCO3A2RU48 225 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 PSMB11A5LHX3 300 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 LINC01548A6NM66 108 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 G3V318 75 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 MT-CO2P00403 227 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 IGHG4P01861 327 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 FABP1P07148 127 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 ELANEP08246 267 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 PPIFP30405 207 aaKnown RBP7.44□□□□□ -1.22
YBX3-215ENST00000544504 NPBWR1P48145 328 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 MFAP4P55083 255 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 AKR1C1Q04828 323 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 TEX38Q6PEX7 206 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 TEPPQ6URK8 271 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 TMEM144Q7Z5S9 345 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 CENPVQ7Z7K6 275 aaPredicted RBP7.44□□□□□ -1.22
YBX3-215ENST00000544504 HAPLN4Q86UW8 402 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 TMEM116Q8NCL8 245 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 STOML3Q8TAV4 291 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 SMIM3Q9BZL3 60 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
YBX3-215ENST00000544504 TRBV7-1A0A0A6YYK4 115 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 UBE2L5PA0A1B0GUS4 154 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 C17orf112F2Z3M2 114 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 I3L2K1 104 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 IGLV1-40P01703 118 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 TRGV3P03979 118 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 FCGR2BP31994 310 aaPredicted RBP7.43□□□□□ -1.22
YBX3-215ENST00000544504 MFAP2P55001 183 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 SELENOTP62341 195 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 RHOGP84095 191 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 CFHR3Q02985 330 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 ATP5G2Q06055 141 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 ARL16Q0P5N6 197 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 FOXE3Q13461 319 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 ACSM6Q6P461 480 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 Q6ZSV7 163 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 BAP18Q8IXM2 172 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 EEF1AKMT3Q96AZ1 226 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 PHYHIPLQ96FC7 376 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 NOL4LQ96MY1 436 aaPredicted RBP7.43□□□□□ -1.22
YBX3-215ENST00000544504 WDR83OSQ9Y284 106 aa7.43□□□□□ -1.22
YBX3-215ENST00000544504 K7EIM0 57 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 OR2J3O76001 311 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 CFDP00746 253 aaPredicted RBP7.42□□□□□ -1.22
YBX3-215ENST00000544504 IFNA7P01567 189 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 PF4V1P10720 104 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 FGF7P21781 194 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 RND2P52198 227 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 TPPP2P59282 170 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 GAMTQ14353 236 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 C15orf32Q32M92 178 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 RPL7L1Q6DKI1 246 aaKnown RBP7.42□□□□□ -1.22
YBX3-215ENST00000544504 BTNL8Q6UX41 500 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 Q6ZS46 218 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 THAP8Q8NA92 274 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 OR4X2Q8NGF9 303 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 OR4X1Q8NH49 305 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 SCARB1Q8WTV0 552 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 WFDC12Q8WWY7 111 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 TAF15Q92804 592 aaKnown RBP eCLIP7.42□□□□□ -1.22
YBX3-215ENST00000544504 BSCL2Q96G97 398 aaPredicted RBP7.42□□□□□ -1.22
YBX3-215ENST00000544504 ACY3Q96HD9 319 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 GINS3Q9BRX5 216 aa7.42□□□□□ -1.22
YBX3-215ENST00000544504 PSMG3Q9BT73 122 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms