RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 DPPA3Q6W0C5 159 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 LFNGQ8NES3 379 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 OR51G1Q8NGK1 321 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 GGACTQ9BVM4 153 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 IGHV3-23P01764 117 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 CX3CL1P78423 397 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 AWAT1Q58HT5 328 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 SOHLH1Q5JUK2 328 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 HSPB9Q9BQS6 159 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 WNT10AQ9GZT5 417 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 A0A0U1RQK1 487 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 HBE1P02100 147 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 CD81P60033 236 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 C5orf64Q2M2E5 130 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 FAM78BQ5VT40 261 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 TMEM144Q7Z5S9 345 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 COMMD1Q8N668 190 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 CLRN3Q8NCR9 226 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 TMEM37Q8WXS4 190 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 ISOC2Q96AB3 205 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 C7orf69Q9H7B7 122 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 HIF1ANQ9NWT6 349 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 LINC00527Q9UJ94 153 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 SLC45A2Q9UMX9 530 aa10.85□□□□□ -0.67
HCFC2-202ENST00000544223 TRAV1-1A0A0B4J248 108 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 CYB5BO43169 146 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 MT-CO2P00403 227 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 OR10J4P0C629 311 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 ATP5G3P48201 142 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 PRR20EP86478 221 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 PRR20CP86479 221 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 PRR20DP86480 221 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 PRR20BP86481 221 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 PRR20AP86496 221 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 HABP2Q14520 560 aaPredicted RBP10.84□□□□□ -0.67
HCFC2-202ENST00000544223 OR5T1Q8NG75 326 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 OR2T10Q8NGZ9 312 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 AURKAIP1Q9NWT8 199 aaPredicted RBP10.84□□□□□ -0.67
HCFC2-202ENST00000544223 MDFIC2A0A1B0GVS7 189 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 PAX8Q06710 450 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 RPS10P5Q9NQ39 176 aa10.84□□□□□ -0.67
HCFC2-202ENST00000544223 MPDU1O75352 247 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 LY6EQ16553 131 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 ASPHD1Q5U4P2 390 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 CST9LP1Q5W188 147 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 OR4F5Q8NH21 305 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 RPUSD4Q96CM3 377 aaKnown RBP10.83□□□□□ -0.68
HCFC2-202ENST00000544223 SLC35E1Q96K37 410 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 OR4F4Q96R69 305 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 BTBD17A6NE02 478 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 ZNF727A8MUV8 499 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 LY86O95711 162 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 MBP02144 154 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 DERL1Q9BUN8 251 aa10.83□□□□□ -0.68
HCFC2-202ENST00000544223 MYO9AB2RTY4 2548 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 SETD2Q9BYW2 2564 aaPredicted RBP10.82□□□□□ -0.68
HCFC2-202ENST00000544223 H3BQ15 152 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 NDUFA3O95167 84 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 LEMD1Q68G75 181 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 NPBQ8NG41 125 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 F11RQ9Y624 299 aaKnown RBP10.82□□□□□ -0.68
HCFC2-202ENST00000544223 SNAPINO95295 136 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 MSMBP08118 114 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 ORM2P19652 201 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 RPL29P47914 159 aaKnown RBP10.82□□□□□ -0.68
HCFC2-202ENST00000544223 SUB1P53999 127 aaKnown RBP eCLIP10.82□□□□□ -0.68
HCFC2-202ENST00000544223 FAM90A2PQ658T7 463 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 CCDC144NLQ6NUI1 221 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 SPNS3Q6ZMD2 512 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 SLC35E3Q7Z769 313 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 Q8N6K4 173 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 MALSU1Q96EH3 234 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 TNFRSF19Q9NS68 423 aa10.82□□□□□ -0.68
HCFC2-202ENST00000544223 CR1P17927 2039 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 C7orf77A4D0Y5 90 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 NPPCP23582 126 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 MEF2BQ02080 365 aaPredicted RBP10.81□□□□□ -0.68
HCFC2-202ENST00000544223 RAB31Q13636 194 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 MINOS1Q5TGZ0 78 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 Q8N9W7 124 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 MINOS1-NBL1R4GNA1 71 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 PGPEP1LA6NFU8 196 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 SEC14L6B5MCN3 397 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 KHDC3LQ587J8 217 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 PATE2Q6UY27 113 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 CYP2G1PQ6ZSU1 146 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 VAX2Q9UIW0 290 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 YTHDF2Q9Y5A9 579 aaKnown RBP10.81□□□□□ -0.68
HCFC2-202ENST00000544223 MTORP42345 2549 aa10.81□□□□□ -0.68
HCFC2-202ENST00000544223 IGHV3OR16-8A0A075B7F1 116 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 IGHV1-69DA0A0B4J2H0 117 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 IGHV3-35A0A0C4DH35 117 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 INS-IGF2F8WCM5 200 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 G3V318 75 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 H3BTX0 84 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms