RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 TMEM50AO95807 157 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RLN2P04090 185 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ZP3P21754 424 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 SLURP1P55000 103 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 PAX9P55771 341 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 FHL3Q13643 280 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 MLANAQ16655 118 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RPEL1Q2QD12 228 aa11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-216ENST00000543995 GNG7O60262 68 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TSC22D2O75157 780 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 DEDDO75618 318 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 NPBWR1P48145 328 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CAV2P51636 162 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TXN2Q99757 166 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ZNF436Q9C0F3 470 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 BMPR1BO00238 502 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TGOLN2O43493 480 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 GGCTO75223 188 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 METTL15P1P0C7V9 234 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 PET100P0DJ07 73 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SLC25A4P12235 298 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CD33P20138 364 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CD69Q07108 199 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OR8G2PQ6IF36 304 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SLC16A13Q7RTY0 426 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 BSCL2Q96G97 398 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
TNFRSF1A-216ENST00000543995 hCG_2014768A0A024R1R8 64 aa11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 NUPL2O15504 423 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OR2C1O95371 312 aa11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 FCGR2BP31994 310 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 PRR31Q5SQ13 230 aa11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ACY3Q96HD9 319 aa11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SLC35E1Q96K37 410 aa11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 WNK1Q9H4A3 2382 aa11.13□□□□□ -0.63
TNFRSF1A-216ENST00000543995 FAM24AA6NFZ4 105 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 E5RGE8 158 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 MPC2O95563 127 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 GPX4P36969 197 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 RND2P52198 227 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SPSB3Q6PJ21 355 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TMEM14EPQ6UXP3 125 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 C11orf1Q9H5F2 150 aa11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-216ENST00000543995 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CLN5O75503 358 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CCNKO75909 580 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 GIPP09681 153 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OR10P1Q8NGE3 313 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ASB13Q8WXK3 278 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CHRDL1Q9BU40 450 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OR5AC2Q9NZP5 309 aa11.11□□□□□ -0.63
TNFRSF1A-216ENST00000543995 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 H0YIZ8 118 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OVOL1O14753 267 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CTSGP08311 255 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 RAP2BP61225 183 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 FAM106AQ4KMX7 169 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 C1QL4Q86Z23 238 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TMEM116Q8NCL8 245 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TRAV30A0A087WSZ9 112 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ZNF320A2RRD8 509 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SMCO3A2RU48 225 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 PRSS46E5RG02 174 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 CST7O76096 145 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OR10J1P30954 320 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ADMP35318 185 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 P2RY1P47900 373 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 AKR1C1Q04828 323 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 FGL1Q08830 312 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 GAMTQ14353 236 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ACOT7LQ6ZUV0 252 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 STX12Q86Y82 276 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TMEM217Q8N7C4 229 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 RNF126Q9BV68 326 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 MBD2Q9UBB5 411 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 IGSF23A1L1A6 192 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SCAF4O95104 1147 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SULT1A1P50225 295 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 TMEM252Q8N6L7 170 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms