RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 ST6GALNAC3Q8NDV1 305 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 COL25A1Q9BXS0 654 aaPredicted RBP14.32□□□□□ -0.12
PTPN6-222ENST00000543744 TRAPPC1Q9Y5R8 145 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 INSIG2Q9Y5U4 225 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 PPIAL4CA0A0B4J2A2 164 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 A0A1W2PRE2 83 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 GGTLC3B5MD39 225 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 BUB1B-PAK6H3BSN5 160 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 PPIAL4GP0DN37 164 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 PRB3Q04118 309 aaPredicted RBP14.31□□□□□ -0.12
PTPN6-222ENST00000543744 KLRB1Q12918 225 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 CENPWQ5EE01 88 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 OR1L4Q8NGR5 311 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 PFDN5Q99471 154 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 SLC25A2Q9BXI2 301 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 DMRT1Q9Y5R6 373 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 TRAV5A0A0B4J249 113 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 PDLIM4P50479 330 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 SELENOTP62341 195 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 SUMO1P63165 101 aaKnown RBP14.31□□□□□ -0.12
PTPN6-222ENST00000543744 C10orf113Q5VZT2 155 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 THAP8Q8NA92 274 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 FAM167A-AS1Q96KT0 104 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 IL36BQ9NZH7 164 aa14.31□□□□□ -0.12
PTPN6-222ENST00000543744 SPTA1P02549 2419 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 IGKV1D-37A0A075B6S9 117 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 IGHV1-3A0A0C4DH29 117 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 IGLC7A0M8Q6 106 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 RBP4P02753 201 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 UBE2L3P68036 154 aaKnown RBP14.3□□□□□ -0.12
PTPN6-222ENST00000543744 ZNF90Q03938 601 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 TNXAQ16473 311 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 MORN5Q5VZ52 161 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 CDPF1Q6NVV7 123 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 BEND2Q8NDZ0 799 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 OR5AU1Q8NGC0 362 aa14.3□□□□□ -0.12
PTPN6-222ENST00000543744 SLC17A3O00476 420 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 RPL27AP46776 148 aaKnown RBP14.29□□□□□ -0.12
PTPN6-222ENST00000543744 CNN1P51911 297 aaKnown RBP14.29□□□□□ -0.12
PTPN6-222ENST00000543744 BPIFB3P59826 476 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 ERVFC1-1P60608 527 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 ETFRF1Q6IPR1 90 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 HCP5Q6MZN7 132 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 MRPL36Q9P0J6 103 aaKnown RBP14.29□□□□□ -0.12
PTPN6-222ENST00000543744 TRAV9-1A0A075B6T8 112 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 AMBPP02760 352 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 CRYGBP07316 175 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 COX7A1P24310 79 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 CNTFRP26992 372 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 OR8B3Q8NGG8 313 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 MISP3Q96FF7 219 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 OR8B2Q96RD0 313 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 SIGLEC9Q9Y336 463 aa14.29□□□□□ -0.12
PTPN6-222ENST00000543744 ANKHD1Q8IWZ3 2542 aaKnown RBP14.28□□□□□ -0.12
PTPN6-222ENST00000543744 OR5I1Q13606 314 aa14.28□□□□□ -0.12
PTPN6-222ENST00000543744 TIGITQ495A1 244 aa14.28□□□□□ -0.12
PTPN6-222ENST00000543744 DNLZQ5SXM8 178 aa14.28□□□□□ -0.12
PTPN6-222ENST00000543744 RPEQ96AT9 228 aa14.28□□□□□ -0.12
PTPN6-222ENST00000543744 ZNF355PQ9NSJ1 428 aa14.28□□□□□ -0.12
PTPN6-222ENST00000543744 AMMECR1Q9Y4X0 333 aaPredicted RBP14.28□□□□□ -0.12
PTPN6-222ENST00000543744 HIST1H1BP16401 226 aaKnown RBP14.27□□□□□ -0.12
PTPN6-222ENST00000543744 COMPP49747 757 aaPredicted RBP14.27□□□□□ -0.12
PTPN6-222ENST00000543744 PATE2Q6UY27 113 aa14.27□□□□□ -0.12
PTPN6-222ENST00000543744 C8orf46Q8TAG6 207 aa14.27□□□□□ -0.12
PTPN6-222ENST00000543744 NAV3Q8IVL0 2385 aa14.27□□□□□ -0.12
PTPN6-222ENST00000543744 ADORA2A-AS1P86434 159 aa14.27□□□□□ -0.13
PTPN6-222ENST00000543744 CDSNQ15517 529 aa14.27□□□□□ -0.13
PTPN6-222ENST00000543744 RPEL1Q2QD12 228 aa14.27□□□□□ -0.13
PTPN6-222ENST00000543744 PVRIGQ6DKI7 326 aa14.27□□□□□ -0.13
PTPN6-222ENST00000543744 C22orf15Q8WYQ4 148 aa14.27□□□□□ -0.13
PTPN6-222ENST00000543744 PAXXQ9BUH6 204 aa14.27□□□□□ -0.13
PTPN6-222ENST00000543744 TNFRSF19Q9NS68 423 aa14.27□□□□□ -0.13
PTPN6-222ENST00000543744 IGF2RP11717 2491 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 MALRD1Q5VYJ5 2156 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 CRYGCP07315 174 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 PYYP10082 97 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 YPEL3P61236 119 aaPredicted RBP14.26□□□□□ -0.13
PTPN6-222ENST00000543744 PPP1R27Q86WC6 154 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 RAB1BQ9H0U4 201 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 ONECUT1Q9UBC0 465 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 V9GYV3 84 aa14.26□□□□□ -0.13
PTPN6-222ENST00000543744 APELAP0DMC3 54 aa14.25□□□□□ -0.13
PTPN6-222ENST00000543744 MFAP2P55001 183 aa14.25□□□□□ -0.13
PTPN6-222ENST00000543744 C22orf46C9J442 243 aa14.25□□□□□ -0.13
PTPN6-222ENST00000543744 LIPFP07098 398 aa14.25□□□□□ -0.13
PTPN6-222ENST00000543744 LINC00305Q7Z4B0 112 aa14.25□□□□□ -0.13
PTPN6-222ENST00000543744 CORTO00230 105 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 RD3LP0DJH9 198 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 LGALS4P56470 323 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 SSX2Q16385 188 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 PRDM13Q9H4Q3 707 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 LY6HO94772 140 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 MOSP00540 346 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 GCGP01275 180 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 ORM2P19652 201 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 JOSD1Q15040 202 aaPredicted RBP14.24□□□□□ -0.13
PTPN6-222ENST00000543744 RUSC1-AS1Q66K80 236 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 C19orf35Q6ZS72 473 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 TMEM116Q8NCL8 245 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 LY6G5BQ8NDX9 201 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms