RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 OR4F4Q96R69 305 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 RNF5Q99942 180 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 PRRT1Q99946 306 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 PRSS22Q9GZN4 317 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 FXYD6Q9H0Q3 95 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 SCP2D1Q9UJQ7 156 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 MPPED1O15442 326 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 FGF16O43320 207 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 IGKV1-16P04430 117 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 LGALS7P47929 136 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 XGP55808 180 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 BLCAPP62952 87 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 KLF9Q13886 244 aaPredicted RBP4.01□□□□□ -1.77
CLIP1-217ENST00000543205 OR2B11Q5JQS5 317 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 IDO2Q6ZQW0 420 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 Q6ZSV7 163 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 LINC00518Q8N0U6 118 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 C5orf56Q8N8D9 126 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 OR51S1Q8NGJ8 323 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 OR51H1Q8NH63 302 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 OR2T6Q8NHC8 308 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 THAP6Q8TBB0 222 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 DEDD2Q8WXF8 326 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 BAALCQ8WXS3 180 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 DDB2Q92466 427 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 ISOC2Q96AB3 205 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 RITA1Q96K30 269 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 TSNAXQ99598 290 aaKnown RBP4.01□□□□□ -1.77
CLIP1-217ENST00000543205 C16orf95Q9H693 158 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 HRASLSQ9HDD0 168 aa4.01□□□□□ -1.77
CLIP1-217ENST00000543205 CLPSL1A2RUU4 121 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 CENPXA8MT69 81 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 PGLYRP1O75594 196 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 CRYZL1O95825 349 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 APOHP02749 345 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 EGR2P11161 476 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 MDKP21741 143 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 CNTFRP26992 372 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 VDAC2P45880 294 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 ELLP55199 621 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 RPL30P62888 115 aaKnown RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 EIF4EBP1Q13541 118 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF846Q147U1 533 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 SURF2Q15527 256 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 C12orf54Q6X4T0 127 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 Q6ZRG5 221 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 LHFPL1Q86WI0 220 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 SPAG16Q8N0X2 631 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 Q8N9W7 124 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 NPBQ8NG41 125 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 OR4S2Q8NH73 311 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF486Q96H40 463 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 SCGB3A2Q96PL1 93 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 SDHCQ99643 169 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 ATP5SQ99766 215 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF702PQ9H963 129 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 RETNQ9HD89 108 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 PLSCR3Q9NRY6 295 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 COPZ2Q9P299 210 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 C14orf166Q9Y224 244 aaKnown RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 NAP1L6A6NFF2 107 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 CTSDP07339 412 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 IL7P13232 177 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 PIGPP57054 158 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 PSG5Q15238 335 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 C5orf64Q2M2E5 130 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 VMA21Q3ZAQ7 101 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 FAM122CQ6P4D5 195 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 SLC35E3Q7Z769 313 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 Q8N2B8 174 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 FAM71E2Q8N5Q1 922 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 TCTEX1D1Q8N7M0 179 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 CCDC71LQ8N9Z2 235 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 DMBX1Q8NFW5 382 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 OR13C8Q8NGS7 320 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 LINC01006Q8NI28 216 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 OSR1Q8TAX0 266 aaPredicted RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 CLCC1Q96S66 551 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 CCDC32Q9BV29 185 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 FBXL15Q9H469 300 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 SLC2A9Q9NRM0 540 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 METTL1Q9UBP6 276 aaKnown RBP4□□□□□ -1.77
CLIP1-217ENST00000543205 SIGLEC9Q9Y336 463 aa4□□□□□ -1.77
CLIP1-217ENST00000543205 ANK2Q01484 3957 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 NOTCH1P46531 2555 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 TRBV9A0A0B4J1U6 114 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 K7EN84 100 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 RBFOX2O43251 390 aaKnown RBP eCLIP3.99□□□□□ -1.77
CLIP1-217ENST00000543205 ATP5LO75964 103 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 NDUFA3O95167 84 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 HPRT1P00492 218 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 HRASP01112 189 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 IGLV2-23P01705 113 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 F2RP25116 425 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 LPAR6P43657 344 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 ERVK-16P61578 105 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 RND3P61587 244 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 BLOC1S1P78537 153 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 RPEL1Q2QD12 228 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 C3orf56Q8N813 242 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms