RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 MRPL20Q9BYC9 149 aaKnown RBP13.46□□□□□ -0.25
KDM2B-216ENST00000543025 PKD1L2Q7Z442 2459 aa13.46□□□□□ -0.25
KDM2B-216ENST00000543025 MGST1P10620 155 aaKnown RBP13.46□□□□□ -0.26
KDM2B-216ENST00000543025 RPL8P62917 257 aaKnown RBP13.46□□□□□ -0.26
KDM2B-216ENST00000543025 ZNF705AQ6ZN79 300 aaPredicted RBP13.46□□□□□ -0.26
KDM2B-216ENST00000543025 VN1R17PQ8TDU5 208 aa13.46□□□□□ -0.26
KDM2B-216ENST00000543025 DCAF16Q9NXF7 216 aa13.46□□□□□ -0.26
KDM2B-216ENST00000543025 SMIM27A0A1W2PRY6 76 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 PSMB11A5LHX3 300 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 NKX6-3A6NJ46 265 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 CD40P25942 277 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 TDGF1P3P51864 188 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 UBE2L3P68036 154 aaKnown RBP13.45□□□□□ -0.26
KDM2B-216ENST00000543025 SLC35B1P78383 322 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 TDRG1Q3Y452 100 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 MRPL52Q86TS9 123 aaKnown RBP13.45□□□□□ -0.26
KDM2B-216ENST00000543025 ZNF714Q96N38 554 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 INS-IGF2F8WCM5 200 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 H0YJW9 148 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 AMY1AP04745 511 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 GPX1P07203 203 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 CHRNB4P30926 498 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 TCL1AP56279 114 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 FAM27E3Q08E93 113 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 C22orf34Q6ZV56 151 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 FAM167A-AS1Q96KT0 104 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 VAMP8Q9BV40 100 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 DNAJC4Q9NNZ3 241 aa13.45□□□□□ -0.26
KDM2B-216ENST00000543025 HLA-DQA1P01909 254 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
KDM2B-216ENST00000543025 OR5AN1Q8NGI8 311 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 SERTAD4Q9NUC0 356 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 CDC42EP3Q9UKI2 254 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 SVILO95425 2214 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 YLPM1P49750 1951 aaKnown RBP13.44□□□□□ -0.26
KDM2B-216ENST00000543025 TPRP12270 2363 aaKnown RBP13.44□□□□□ -0.26
KDM2B-216ENST00000543025 A0A1W2PN81 502 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 M0QZK8 103 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 TNFRSF1AP19438 455 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 MEF2CQ06413 473 aaPredicted RBP13.44□□□□□ -0.26
KDM2B-216ENST00000543025 TMEM177Q53S58 311 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 MORN5Q5VZ52 161 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 NUP37Q8NFH4 326 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
KDM2B-216ENST00000543025 MIEN1Q9BRT3 115 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 ZNF586Q9NXT0 402 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 PAM16Q9Y3D7 125 aa13.44□□□□□ -0.26
KDM2B-216ENST00000543025 TNCP24821 2201 aa13.43□□□□□ -0.26
KDM2B-216ENST00000543025 TRAV5A0A0B4J249 113 aa13.43□□□□□ -0.26
KDM2B-216ENST00000543025 CRYABP02511 175 aaKnown RBP13.43□□□□□ -0.26
KDM2B-216ENST00000543025 COMPP49747 757 aaPredicted RBP13.43□□□□□ -0.26
KDM2B-216ENST00000543025 CCL8P80075 99 aa13.43□□□□□ -0.26
KDM2B-216ENST00000543025 KIAA1644Q3SXP7 199 aa13.43□□□□□ -0.26
KDM2B-216ENST00000543025 KCNS1Q96KK3 526 aa13.43□□□□□ -0.26
KDM2B-216ENST00000543025 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
KDM2B-216ENST00000543025 DYSFO75923 2080 aa13.43□□□□□ -0.26
KDM2B-216ENST00000543025 MRPL54Q6P161 138 aaKnown RBP13.43□□□□□ -0.26
KDM2B-216ENST00000543025 FBXL7Q9UJT9 491 aa13.43□□□□□ -0.26
KDM2B-216ENST00000543025 E7EUB6 86 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 ZNF253O75346 499 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 OR4C13Q8NGP0 309 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 VSTM2AQ8TAG5 236 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 TBL2Q9Y4P3 447 aaKnown RBP13.42□□□□□ -0.26
KDM2B-216ENST00000543025 IZUMO1RA6ND01 250 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 COX7A2P2O60397 106 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 CCL3L1P16619 93 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 AMTP48728 403 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 LY6DQ14210 128 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 OR1L4Q8NGR5 311 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 TMEM167AQ8TBQ9 72 aa13.42□□□□□ -0.26
KDM2B-216ENST00000543025 BMPR1BO00238 502 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 SRIP30626 198 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 CEACAM8P31997 349 aaPredicted RBP13.41□□□□□ -0.26
KDM2B-216ENST00000543025 REG1BP48304 166 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 ZNF124Q15973 351 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 NHLRC2Q8NBF2 726 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 RCHY1Q96PM5 261 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 ZNF430Q9H8G1 570 aaPredicted RBP13.41□□□□□ -0.26
KDM2B-216ENST00000543025 ZNF355PQ9NSJ1 428 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 AMMECR1Q9Y4X0 333 aaPredicted RBP13.41□□□□□ -0.26
KDM2B-216ENST00000543025 USP24Q9UPU5 2620 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
KDM2B-216ENST00000543025 BPIFB3P59826 476 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 KRTDAPP60985 99 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 SSBP2P81877 361 aaPredicted RBP13.41□□□□□ -0.26
KDM2B-216ENST00000543025 C10orf113Q5VZT2 155 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 TMEM108Q6UXF1 575 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 PDPNQ86YL7 162 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 PAXXQ9BUH6 204 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 NRN1Q9NPD7 142 aa13.41□□□□□ -0.26
KDM2B-216ENST00000543025 A0A1W2PS18 150 aa13.4□□□□□ -0.26
KDM2B-216ENST00000543025 PYYP10082 97 aa13.4□□□□□ -0.26
KDM2B-216ENST00000543025 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.26
KDM2B-216ENST00000543025 WT1-ASQ06250 92 aa13.4□□□□□ -0.26
KDM2B-216ENST00000543025 KLRB1Q12918 225 aa13.4□□□□□ -0.26
KDM2B-216ENST00000543025 PRR30Q53SZ7 412 aaPredicted RBP13.4□□□□□ -0.26
KDM2B-216ENST00000543025 OR4B1Q8NGF8 309 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms