RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 ISG15P05161 165 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 RAB5BP61020 215 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 RHOGP84095 191 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 ALKAL1Q6UXT8 129 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 HIST3H2BBQ8N257 126 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 LRRC25Q8N386 305 aaPredicted RBP0.32□□□□□ -2.36
KNTC1-213ENST00000542727 TERB2Q8NHR7 220 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 H1FXQ92522 213 aaKnown RBP0.32□□□□□ -2.36
KNTC1-213ENST00000542727 SLC35B4Q969S0 331 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 LINC00526Q96FQ7 95 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 MRPS26Q9BYN8 205 aaKnown RBP0.32□□□□□ -2.36
KNTC1-213ENST00000542727 COMMD5Q9GZQ3 224 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 PRTFDC1Q9NRG1 225 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 CDC42SE1Q9NRR8 79 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 NUP210LQ5VU65 1888 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 C9orf84Q5VXU9 1444 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 MYO5AQ9Y4I1 1855 aaKnown RBP0.31□□□□□ -2.36
KNTC1-213ENST00000542727 MYLKQ15746 1914 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 SNAPC4Q5SXM2 1469 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 TRAV9-1A0A075B6T8 112 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 CCDC160A6NGH7 325 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 BUB1B-PAK6H3BSN5 160 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 TGOLN2O43493 480 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 DCTN3O75935 186 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 UBL3O95164 117 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 CRYZL1O95825 349 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 DNAL4O96015 105 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 CD79AP11912 226 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 ZNF25P17030 456 aaPredicted RBP0.31□□□□□ -2.36
KNTC1-213ENST00000542727 RPL5P46777 297 aaKnown RBP0.31□□□□□ -2.36
KNTC1-213ENST00000542727 SPCS3P61009 180 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 SNRPD2P62316 118 aaKnown RBP0.31□□□□□ -2.36
KNTC1-213ENST00000542727 SPOPLQ6IQ16 392 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 KRTAP19-3Q7Z4W3 81 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 SBSPONQ8IVN8 264 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 Q8N6K4 173 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 OR13C4Q8NGS5 318 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 SFT2D1Q8WV19 159 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 BORCS5Q969J3 196 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 TOMM6Q96B49 74 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 GPR146Q96CH1 333 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 PPP1R2P1Q96PQ5 205 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 AMELYQ99218 206 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 RASL12Q9NYN1 266 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 TAS2R4Q9NYW5 299 aa0.31□□□□□ -2.36
KNTC1-213ENST00000542727 MED12Q93074 2177 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 KMT2DO14686 5537 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 WRNQ14191 1432 aaPredicted RBP eCLIP0.3□□□□□ -2.36
KNTC1-213ENST00000542727 EXOC1LA0A1B0GW35 172 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 CLDN25C9JDP6 229 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 KCNK1O00180 336 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 FAAHO00519 579 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 NCR3O14931 201 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 CETN3O15182 167 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 PROSCO94903 275 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 TCL1BO95988 128 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 IFNA10P01566 189 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 OR5G3P0C626 314 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 BAALC-AS2P0C853 105 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 COX6A1P12074 109 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 MIFP14174 115 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 RPS20P60866 119 aaKnown RBP0.3□□□□□ -2.36
KNTC1-213ENST00000542727 CDC42P60953 191 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 PDE6HQ13956 83 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 COTL1Q14019 142 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 DEFB113Q30KQ7 82 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 SPRNQ5BIV9 151 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 CDKL4Q5MAI5 379 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 TEX261Q6UWH6 196 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 TMEM86BQ8N661 226 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 OR52R1Q8NGF1 315 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 DDI1Q8WTU0 396 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 PTH2Q96A98 100 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 OR51V1Q9H2C8 321 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 OSTCQ9NRP0 149 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 GUCA1BQ9UMX6 200 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 U3KQ87 197 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 PHRF1Q9P1Y6 1649 aaKnown RBP0.3□□□□□ -2.36
KNTC1-213ENST00000542727 ASCC3Q8N3C0 2202 aaKnown RBP0.3□□□□□ -2.36
KNTC1-213ENST00000542727 MTUS2Q5JR59 1369 aa0.3□□□□□ -2.36
KNTC1-213ENST00000542727 GOLGA6L19H0YKK7 550 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 LYZL6O75951 148 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 OR2B3O76000 313 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 HIST1H1TP22492 207 aaPredicted RBP0.29□□□□□ -2.36
KNTC1-213ENST00000542727 S100A4P26447 101 aaKnown RBP0.29□□□□□ -2.36
KNTC1-213ENST00000542727 PSME3P61289 254 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 CNBPP62633 177 aaKnown RBP0.29□□□□□ -2.36
KNTC1-213ENST00000542727 MPV17LQ2QL34 196 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 TRAPPC6BQ86SZ2 158 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 C20orf196Q8IYI0 205 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 CLECL1Q8IZS7 167 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 LINC00301Q8NCQ3 95 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 PATE1Q8WXA2 126 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 NIPSNAP1Q9BPW8 284 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 SLC35A3Q9Y2D2 325 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 TMEM56-RWDD3S4R434 201 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 UBR2Q8IWV8 1755 aa0.29□□□□□ -2.36
KNTC1-213ENST00000542727 ZGRF1Q86YA3 2104 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 UNC13CQ8NB66 2214 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 TRAV12-1A0A0B4J245 112 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms