RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TMEM50AO95807 157 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 CD7P09564 240 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 IL7P13232 177 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 NPBWR1P48145 328 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 CD81P60033 236 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 UBE2MP61081 183 aaKnown RBP11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 PPP1R1AQ13522 171 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 MLANAQ16655 118 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 GUCA2BQ16661 112 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 C2orf83Q53S99 150 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 CENPSQ8N2Z9 138 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 DUSP18Q8NEJ0 188 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 NEURL2Q9BR09 285 aa11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
ECHDC2-223ENST00000542552 IGHV3OR16-8A0A075B7F1 116 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 PITX3O75364 302 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 VAMP1P23763 118 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 BTCP35070 178 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 INPP1P49441 399 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 OR4X1Q8NH49 305 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 C7orf50Q9BRJ6 194 aaKnown RBP11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 TM2D3Q9BRN9 247 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 C20orf24Q9BUV8 137 aa11.59□□□□□ -0.55
ECHDC2-223ENST00000542552 A6NHS1 94 aa11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 SLC25A6P12236 298 aa11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 LINC00299Q6ZSB3 139 aa11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 SLC24A4Q8NFF2 622 aa11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 RNASEH2CQ8TDP1 164 aaKnown RBP11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 RBKSQ9H477 322 aa11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 SMPXQ9UHP9 88 aa11.58□□□□□ -0.56
ECHDC2-223ENST00000542552 CENPXA8MT69 81 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 TSPAN4O14817 238 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 ZNF207O43670 478 aaKnown RBP11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 CLN5O75503 358 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 SCAF4O95104 1147 aaKnown RBP11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 NXPH3O95157 252 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 OPRK1P41145 380 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 WWC2-AS2Q96NR7 200 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 HIPK2Q9H2X6 1198 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 TUBA4BQ9H853 241 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 ZFAND3Q9H8U3 227 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 TMED3Q9Y3Q3 217 aa11.57□□□□□ -0.56
ECHDC2-223ENST00000542552 KMT2CQ8NEZ4 4911 aaKnown RBP11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 IGHV7-4-1A0A0J9YVY3 117 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 LINC00854A0A1B0GVQ3 168 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 C9orf170A2RU37 121 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 CHEK1O14757 476 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 PLA2G10O15496 165 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 YIF1AO95070 293 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 IGKV1-17P01599 117 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 NPY1RP25929 384 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 HAGHQ16775 308 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 PRSS54Q6PEW0 395 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 ZNF600Q6ZNG1 722 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 RBPMS2Q6ZRY4 209 aaKnown RBP11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 NOXA1Q86UR1 476 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 DEFB125Q8N687 156 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 DTD1Q8TEA8 209 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 SPAG8Q99932 426 aaPredicted RBP11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 FLVCR2Q9UPI3 526 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 U3KQ87 197 aa11.56□□□□□ -0.56
ECHDC2-223ENST00000542552 TRAV14DV4A0A0A6YYC5 116 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 RPS10-NUDT3A0A1W2PQS6 291 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 SLC25A4P12235 298 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 LAMTOR1Q6IAA8 161 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 SLC16A13Q7RTY0 426 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 OR52B4Q8NGK2 314 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 RHPN1-AS1Q9BWJ2 59 aa11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
ECHDC2-223ENST00000542552 RBMY1BA6NDE4 496 aaKnown RBP11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 RBMY1EA6NEQ0 496 aaKnown RBP11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 FAM90A26D6RGX4 464 aa11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 OR4E1P0C645 316 aa11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 RBMY1DP0C7P1 496 aaKnown RBP11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 DHRS2Q13268 280 aa11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 CNPY1Q3B7I2 92 aa11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 RNF2Q99496 336 aa11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 GINS3Q9BRX5 216 aa11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
ECHDC2-223ENST00000542552 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 IFNA10P01566 189 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 HOXB5P09067 269 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 IGLC1P0CG04 106 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 TIGITQ495A1 244 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 GGNBP1Q5YKI7 109 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 FAM90A2PQ658T7 463 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 CCDC32Q9BV29 185 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
ECHDC2-223ENST00000542552 IGHV3-49A0A0A0MS15 119 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms