RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TXN2Q99757 166 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 GNB4Q9HAV0 340 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 IGSF23A1L1A6 192 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 PMS2P5A8MQ11 134 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 RPL12P30050 165 aaKnown RBP17.9■□□□□ 0.46
HOMER3-205ENST00000542541 HBG1P69891 147 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 HBG2P69892 147 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 BAXQ07812 192 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 MLANAQ16655 118 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 ACSM6Q6P461 480 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 SLC16A13Q7RTY0 426 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 ZNF546Q86UE3 836 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 KLHL30-AS1Q8NEE0 82 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 ZNF502Q8TBZ5 544 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 S4R3C0 116 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 FXYD6-FXYD2A0A087WZ82 144 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 PRSS46E5RG02 174 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 CST7O76096 145 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 NPBWR1P48145 328 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 RUNX1Q01196 453 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 INO80EQ8NBZ0 244 aaPredicted RBP17.89■□□□□ 0.45
HOMER3-205ENST00000542541 SLC35E1Q96K37 410 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 OR5B12Q96R08 314 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 GGACTQ9BVM4 153 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 ZC4H2Q9NQZ6 224 aa17.89■□□□□ 0.45
HOMER3-205ENST00000542541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.88■□□□□ 0.45
HOMER3-205ENST00000542541 A0A1W2PRX2 142 aa17.88■□□□□ 0.45
HOMER3-205ENST00000542541 G3V3Q6 166 aa17.88■□□□□ 0.45
HOMER3-205ENST00000542541 S100A11P31949 105 aa17.88■□□□□ 0.45
HOMER3-205ENST00000542541 FCGR2BP31994 310 aaPredicted RBP17.88■□□□□ 0.45
HOMER3-205ENST00000542541 EWSR1Q01844 656 aaKnown RBP eCLIP17.88■□□□□ 0.45
HOMER3-205ENST00000542541 TMEM217Q8N7C4 229 aa17.88■□□□□ 0.45
HOMER3-205ENST00000542541 PEF1Q9UBV8 284 aaKnown RBP17.88■□□□□ 0.45
HOMER3-205ENST00000542541 SMLR1H3BR10 107 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 I3L521 148 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 IGHV3-48P01763 117 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 IGHV3-23P01764 117 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 CLEC3BP05452 202 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 DLK1P80370 383 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 Q56UQ5 140 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 UBAC2Q8NBM4 344 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 TMEM116Q8NCL8 245 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 OR4X1Q8NH49 305 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 SCGB2A1O75556 95 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 NSUN5P1Q3KNT7 163 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 HIST2H2BDQ6DRA6 164 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 CLEC19AQ6UXS0 136 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 CCDC140Q96MF4 163 aa17.87■□□□□ 0.45
HOMER3-205ENST00000542541 ANKRD34BA5PLL1 514 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 RND2P52198 227 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 NHLH2Q02577 135 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 SLC38A11Q08AI6 406 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 GAMTQ14353 236 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 ACOT7LQ6ZUV0 252 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 HAPLN4Q86UW8 402 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 ACY3Q96HD9 319 aa17.86■□□□□ 0.45
HOMER3-205ENST00000542541 STAB1Q9NY15 2570 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 TRAV30A0A087WSZ9 112 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 ADARB2-AS1A8MUL3 147 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 FNDC10F2Z333 226 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 GNG7O60262 68 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 HSPB1P04792 205 aaKnown RBP17.85■□□□□ 0.45
HOMER3-205ENST00000542541 ARL16Q0P5N6 197 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 ATP6V1FQ16864 119 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 SPSB3Q6PJ21 355 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 C18orf65Q6ZTR6 163 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 LILRB2Q8N423 598 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 OR1S2Q8NGQ3 325 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 BSCL2Q96G97 398 aaPredicted RBP17.85■□□□□ 0.45
HOMER3-205ENST00000542541 AQP10Q96PS8 301 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 TNFSF18Q9UNG2 199 aa17.85■□□□□ 0.45
HOMER3-205ENST00000542541 CLN5O75503 358 aa17.84■□□□□ 0.45
HOMER3-205ENST00000542541 GPR183P32249 361 aa17.84■□□□□ 0.45
HOMER3-205ENST00000542541 C8orf86Q6ZUL3 223 aa17.84■□□□□ 0.45
HOMER3-205ENST00000542541 NPIPB3Q92617 1050 aa17.84■□□□□ 0.45
HOMER3-205ENST00000542541 NEURL2Q9BR09 285 aa17.84■□□□□ 0.45
HOMER3-205ENST00000542541 HSPB11Q9Y547 144 aa17.84■□□□□ 0.45
HOMER3-205ENST00000542541 OR2T8A6NH00 312 aa17.83■□□□□ 0.45
HOMER3-205ENST00000542541 HMSDA8MTL9 139 aa17.83■□□□□ 0.45
HOMER3-205ENST00000542541 ARL3P36405 182 aa17.83■□□□□ 0.45
HOMER3-205ENST00000542541 OR5C1Q8NGR4 320 aa17.83■□□□□ 0.45
HOMER3-205ENST00000542541 DPF1Q92782 380 aa17.83■□□□□ 0.45
HOMER3-205ENST00000542541 MRPL36Q9P0J6 103 aaKnown RBP17.83■□□□□ 0.45
HOMER3-205ENST00000542541 SMCO3A2RU48 225 aa17.83■□□□□ 0.44
HOMER3-205ENST00000542541 F8W735 103 aaPredicted RBP17.83■□□□□ 0.44
HOMER3-205ENST00000542541 NUPL2O15504 423 aaKnown RBP17.83■□□□□ 0.44
HOMER3-205ENST00000542541 C1QBP02746 253 aa17.83■□□□□ 0.44
HOMER3-205ENST00000542541 AKR1C1Q04828 323 aa17.83■□□□□ 0.44
HOMER3-205ENST00000542541 OR11H1Q8NG94 326 aa17.83■□□□□ 0.44
HOMER3-205ENST00000542541 OR1N2Q8NGR9 330 aa17.83■□□□□ 0.44
HOMER3-205ENST00000542541 NPVFQ9HCQ7 196 aa17.83■□□□□ 0.44
HOMER3-205ENST00000542541 ARPC5O15511 151 aa17.82■□□□□ 0.44
HOMER3-205ENST00000542541 TGOLN2O43493 480 aa17.82■□□□□ 0.44
HOMER3-205ENST00000542541 PFDN1O60925 122 aa17.82■□□□□ 0.44
HOMER3-205ENST00000542541 OR4F17Q8NGA8 305 aa17.82■□□□□ 0.44
HOMER3-205ENST00000542541 OR4F4Q96R69 305 aa17.82■□□□□ 0.44
HOMER3-205ENST00000542541 TMEM147Q9BVK8 224 aa17.82■□□□□ 0.44
HOMER3-205ENST00000542541 UQCC1Q9NVA1 299 aa17.82■□□□□ 0.44
HOMER3-205ENST00000542541 LINC01619G3V211 115 aa17.81■□□□□ 0.44
HOMER3-205ENST00000542541 GGCTO75223 188 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms