RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 A0A1B0GTI1 187 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 SPAARA0A1B0GVQ0 90 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 CELA2AP08217 269 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 SELLP14151 372 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 SRSF3P84103 164 aaKnown RBP11.79□□□□□ -0.52
TRPM1-203ENST00000542188 A0A1B0GW64 132 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 FAM166AQ6J272 317 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 NEGR1Q7Z3B1 354 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 SPSB2Q99619 263 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 A0A087WX48 190 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 D6R8Y8 96 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 VCYO14598 125 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 IFITM1P13164 125 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 TIMP3P35625 211 aa11.79□□□□□ -0.52
TRPM1-203ENST00000542188 CD33P20138 364 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 Q6ZT83 130 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 NPIPB5A8MRT5 1133 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 IQCF6A8MYZ5 107 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 MPZP25189 248 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 RPL36AP83881 106 aaKnown RBP11.78□□□□□ -0.52
TRPM1-203ENST00000542188 ERCC8Q13216 396 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 RPL36ALQ969Q0 106 aaKnown RBP11.78□□□□□ -0.52
TRPM1-203ENST00000542188 WISP3O95389 354 aaPredicted RBP11.78□□□□□ -0.52
TRPM1-203ENST00000542188 PYYP10082 97 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 PPIFP30405 207 aaKnown RBP11.78□□□□□ -0.52
TRPM1-203ENST00000542188 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 SIGLEC15Q6ZMC9 328 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 UBE2DNLQ8IWF7 75 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 RNF126Q9BV68 326 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 MRPL27Q9P0M9 148 aaKnown RBP11.78□□□□□ -0.52
TRPM1-203ENST00000542188 LAMB1P07942 1786 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 YPEL1O60688 119 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 EFNB3Q15768 340 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 YPEL2Q96QA6 119 aa11.78□□□□□ -0.52
TRPM1-203ENST00000542188 PSG3Q16557 428 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 MPV17L2Q567V2 206 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 SNHG12Q9BXW3 62 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 UBL5Q9BZL1 73 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 hDV102S1A0JD36 115 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 PCOLCEQ15113 449 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 RCHY1Q96PM5 261 aa11.77□□□□□ -0.52
TRPM1-203ENST00000542188 NCR2O95944 276 aa11.77□□□□□ -0.53
TRPM1-203ENST00000542188 NRN1LQ496H8 165 aa11.77□□□□□ -0.53
TRPM1-203ENST00000542188 TIMM21Q9BVV7 248 aa11.77□□□□□ -0.53
TRPM1-203ENST00000542188 SP9P0CG40 484 aa11.77□□□□□ -0.53
TRPM1-203ENST00000542188 COLCA1Q6ZS62 124 aa11.77□□□□□ -0.53
TRPM1-203ENST00000542188 DUTP33316 252 aaKnown RBP11.77□□□□□ -0.53
TRPM1-203ENST00000542188 ZNF876PQ49A33 203 aa11.77□□□□□ -0.53
TRPM1-203ENST00000542188 TRBV6-7A0A0A0MS04 114 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 IGHV3-11P01762 117 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 TRBV20-1A0A075B6N2 111 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 IGHV3OR16-8A0A075B7F1 116 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 LINC00271P0C7V0 271 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 LOC101059948A0A1B0GTJ6 334 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 SYS1-DBNDD2H3BUS1 97 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 PRSS22Q9GZN4 317 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 SAA2-SAA4A0A096LPE2 208 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 SMAD7O15105 426 aaKnown RBP11.76□□□□□ -0.53
TRPM1-203ENST00000542188 CXCL1P09341 107 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 SAA2P0DJI9 122 aaPredicted RBP11.76□□□□□ -0.53
TRPM1-203ENST00000542188 PRCDQ00LT1 54 aa11.76□□□□□ -0.53
TRPM1-203ENST00000542188 A0A1W2PRX2 142 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 COLCA2A8K830 154 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 FHL5Q5TD97 284 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 COX6A1P12074 109 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 PMVKQ15126 192 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 C1QL2Q7Z5L3 287 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 PPDPFLQ8WWR9 84 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 RREB1Q92766 1687 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 LSM4Q9Y4Z0 139 aaKnown RBP11.75□□□□□ -0.53
TRPM1-203ENST00000542188 LY96Q9Y6Y9 160 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 DDX60LQ5H9U9 1706 aaKnown RBP11.75□□□□□ -0.53
TRPM1-203ENST00000542188 TMEM126AQ9H061 195 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 TAF1P21675 1872 aa11.75□□□□□ -0.53
TRPM1-203ENST00000542188 DMRTC2Q8IXT2 367 aaPredicted RBP11.74□□□□□ -0.53
TRPM1-203ENST00000542188 C1QTNF5Q9BXJ0 243 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 A0A0G2JK05 382 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 CD5P06127 495 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 SS18Q15532 418 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 IGKV1-8A0A0C4DH67 115 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 C1QCP02747 245 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 DEPPQ9NTK1 212 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
TRPM1-203ENST00000542188 NDUFC2O95298 119 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
TRPM1-203ENST00000542188 PAX8Q06710 450 aa11.73□□□□□ -0.53
TRPM1-203ENST00000542188 GREM1O60565 184 aa11.73□□□□□ -0.53
TRPM1-203ENST00000542188 LYZL1Q6UWQ5 148 aa11.73□□□□□ -0.53
TRPM1-203ENST00000542188 AGMATQ9BSE5 352 aa11.73□□□□□ -0.53
TRPM1-203ENST00000542188 FAM168AQ92567 244 aa11.73□□□□□ -0.53
TRPM1-203ENST00000542188 WDR83OSQ9Y284 106 aa11.73□□□□□ -0.53
TRPM1-203ENST00000542188 LY6G5BQ8NDX9 201 aa11.73□□□□□ -0.53
TRPM1-203ENST00000542188 TRAV1-1A0A0B4J248 108 aa11.72□□□□□ -0.53
TRPM1-203ENST00000542188 PRIMA1Q86XR5 153 aa11.72□□□□□ -0.53
TRPM1-203ENST00000542188 ZNF114Q8NC26 417 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms