RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 COL6A6A6NMZ7 2263 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 hADV38S2A0JD32 116 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 E7EQL1 145 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 PLAUP00749 431 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.78
RNF4-222ENST00000541204 RBPJQ06330 500 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 TMEM183BQ1AE95 376 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 TEX36Q5VZQ5 186 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 OR10W1Q8NGF6 305 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 OR9G1Q8NH87 305 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 C20orf144Q9BQM9 153 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 MIEN1Q9BRT3 115 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 VAMP8Q9BV40 100 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 TANC2Q9HCD6 1990 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 PPIAL4EA0A075B759 164 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 TRBV9A0A0B4J1U6 114 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 FNDC10F2Z333 226 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 PPIAL4DF5H284 164 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 LYNX1G3V0Z9 82 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 UPK2O00526 184 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 CT45A6P0DMU7 189 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 CT45A5P0DMU8 189 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 CT45A7P0DMV0 189 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 PPIAL4FP0DN26 164 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 LYNX1P0DP58 116 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 MGST1P10620 155 aaKnown RBP10.15□□□□□ -0.78
RNF4-222ENST00000541204 ZNF25P17030 456 aaPredicted RBP10.15□□□□□ -0.78
RNF4-222ENST00000541204 KRTDAPP60985 99 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 TIGITQ495A1 244 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 SIGLECL1Q8N7X8 197 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 ADTRPQ96IZ2 230 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 PPIAL4AQ9Y536 164 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 ARFGEF3Q5TH69 2177 aa10.15□□□□□ -0.78
RNF4-222ENST00000541204 A6NNC1 897 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 GPX1P07203 203 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 POU2AF1Q16633 256 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 MRPL54Q6P161 138 aaKnown RBP10.14□□□□□ -0.79
RNF4-222ENST00000541204 TMEM136Q6ZRR5 245 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 NHLRC2Q8NBF2 726 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 RNASE6Q93091 150 aaKnown RBP10.14□□□□□ -0.79
RNF4-222ENST00000541204 RCHY1Q96PM5 261 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 SLC35D1Q9NTN3 355 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
RNF4-222ENST00000541204 ARL2-SNX15V9GYD0 113 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 SHISA9B4DS77 424 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 TMEM178BH3BS89 294 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 IGLV2-8P01709 118 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 DLX1P56177 255 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 TMEM200BQ69YZ2 307 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 RAB9BQ9NP90 201 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 SERTAD4Q9NUC0 356 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 ZNF257Q9Y2Q1 563 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 ANKHD1Q8IWZ3 2542 aaKnown RBP10.14□□□□□ -0.79
RNF4-222ENST00000541204 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
RNF4-222ENST00000541204 BRS3P32247 399 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 IBA57Q5T440 356 aaKnown RBP10.14□□□□□ -0.79
RNF4-222ENST00000541204 MORN5Q5VZ52 161 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 SLC35E1Q96K37 410 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 OSTCQ9NRP0 149 aa10.14□□□□□ -0.79
RNF4-222ENST00000541204 TBL2Q9Y4P3 447 aaKnown RBP10.14□□□□□ -0.79
RNF4-222ENST00000541204 TRAV5A0A0B4J249 113 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.13□□□□□ -0.79
RNF4-222ENST00000541204 OR5G3P0C626 314 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 SAA1P0DJI8 122 aaPredicted RBP10.13□□□□□ -0.79
RNF4-222ENST00000541204 DIAPH2-AS1Q14236 149 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 ISLRO14498 428 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
RNF4-222ENST00000541204 PMCHP20382 165 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 TAS2R45P59539 299 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 BATFQ16520 125 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 RTL8BQ17RB0 113 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 C2orf83Q53S99 150 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 CYB5R2Q6BCY4 276 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 WDR73Q6P4I2 378 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 SLC25A48Q6ZT89 311 aaKnown RBP10.13□□□□□ -0.79
RNF4-222ENST00000541204 OR2T6Q8NHC8 308 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 IGF2BP2-AS1Q96M15 143 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 ZNF714Q96N38 554 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 SLC25A33Q9BSK2 321 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 NCOR1P1Q9H4R4 102 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 MSRB2Q9Y3D2 182 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 LINC00312Q9Y6C7 94 aa10.13□□□□□ -0.79
RNF4-222ENST00000541204 VSTM5A8MXK1 200 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 M0QZK8 103 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 ZNF253O75346 499 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 MT-ND6P03923 174 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 RPLP1P05386 114 aaKnown RBP10.12□□□□□ -0.79
RNF4-222ENST00000541204 SRIP30626 198 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 AMTP48728 403 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 Q8N976 141 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 MRPL20Q9BYC9 149 aaKnown RBP10.12□□□□□ -0.79
RNF4-222ENST00000541204 NRN1Q9NPD7 142 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 ZNF586Q9NXT0 402 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 A0A1W2PS18 150 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 DIRC3C9JPN6 131 aa10.12□□□□□ -0.79
RNF4-222ENST00000541204 NDUFB3O43676 98 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms