RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 MUC21Q5SSG8 566 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 SLC25A34Q6PIV7 304 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 TEX43Q6ZNM6 134 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 CENPVQ7Z7K6 275 aaPredicted RBP10.67□□□□□ -0.7
MSH6-210ENST00000540021 UBALD2Q8IYN6 164 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 IFI27L2Q9H2X8 130 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 WNT2P09544 360 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 CA7P43166 264 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 V9GYV3 84 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 A8MWL6 223 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 VMA21Q3ZAQ7 101 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 RAB37Q96AX2 223 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 ASCL3Q9NQ33 180 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 ATG2AQ2TAZ0 1938 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 A0A1W2PN81 502 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 FBLL1A6NHQ2 334 aaKnown RBP10.66□□□□□ -0.7
MSH6-210ENST00000540021 SAA1P0DJI8 122 aaPredicted RBP10.66□□□□□ -0.7
MSH6-210ENST00000540021 TSPOP30536 169 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 ZNF134P52741 427 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 SLAQ13239 276 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 HES1Q14469 280 aa10.66□□□□□ -0.7
MSH6-210ENST00000540021 IGHV2OR16-5A0A0B4J2B6 119 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 C9JCJ5 164 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 IGKV1-16P04430 117 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 IGLC2P0DOY2 106 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 FBLN7Q53RD9 439 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 SNRNP40Q96DI7 357 aaKnown RBP10.65□□□□□ -0.7
MSH6-210ENST00000540021 ZNF430Q9H8G1 570 aaPredicted RBP10.65□□□□□ -0.7
MSH6-210ENST00000540021 TNFRSF19Q9NS68 423 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 TRAV9-2A0A087WT02 112 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 YPEL1O60688 119 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 AREGP15514 252 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 OR10J3Q5JRS4 329 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 LDLRAD2Q5SZI1 272 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 TMEM136Q6ZRR5 245 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 C9orf106Q8NAJ2 232 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 YPEL2Q96QA6 119 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 GGTLC3B5MD39 225 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 DLL1O00548 723 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 COX7A1P24310 79 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 FAM168AQ92567 244 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 IDI2-AS1Q9NZ38 188 aa10.65□□□□□ -0.7
MSH6-210ENST00000540021 IGKV1D-17A0A075B6S4 117 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 TRAV17A0A0B4J275 112 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 CORTO00230 105 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 FCER1GP30273 86 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 AARDQ4LEZ3 155 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 NIT1Q86X76 327 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 FAM222BQ8WU58 562 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 PERPQ96FX8 193 aa10.65□□□□□ -0.71
MSH6-210ENST00000540021 CDX2Q99626 313 aaPredicted RBP10.65□□□□□ -0.71
MSH6-210ENST00000540021 KMT2EQ8IZD2 1858 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 K7EQM0 130 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 CCL3L1P16619 93 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 VDAC2P45880 294 aaPredicted RBP10.64□□□□□ -0.71
MSH6-210ENST00000540021 Q0VG73 95 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 BPIFA4PQ86YQ2 179 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 GAL3ST2Q9H3Q3 398 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 FAM181BA6NEQ2 426 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 BRWD1-AS2P59051 145 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 HBBP68871 147 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 DUX4L9Q6RFH8 374 aaPredicted RBP10.64□□□□□ -0.71
MSH6-210ENST00000540021 ASCL2Q99929 193 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 NAA38Q9BRA0 125 aaKnown RBP10.64□□□□□ -0.71
MSH6-210ENST00000540021 SFXN3Q9BWM7 321 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 MRPL20Q9BYC9 149 aaKnown RBP10.64□□□□□ -0.71
MSH6-210ENST00000540021 SLC25A10Q9UBX3 287 aaPredicted RBP10.64□□□□□ -0.71
MSH6-210ENST00000540021 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
MSH6-210ENST00000540021 KBTBD11-OT1A0A1B0GTJ5 212 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 SMIM15Q7Z3B0 74 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 NUP35Q8NFH5 326 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 OR52E5Q8NH55 327 aa10.64□□□□□ -0.71
MSH6-210ENST00000540021 FRYLO94915 3013 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 J3QW42 95 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 NDUFB3O43676 98 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 GOLT1AQ6ZVE7 132 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 GCSAMQ8N6F7 178 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 KIR3DL3Q8N743 410 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 C18orf32Q8TCD1 76 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 SRSF12Q8WXF0 261 aaKnown RBP10.63□□□□□ -0.71
MSH6-210ENST00000540021 GRAMD2BQ96HH9 432 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 FDCSPQ8NFU4 85 aa10.63□□□□□ -0.71
MSH6-210ENST00000540021 HCFC1P51610 2035 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 TEX50A0A1B0GTY4 177 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 NBEAP1P0C6P0 100 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 NMUP48645 174 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 SELENOTP62341 195 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
MSH6-210ENST00000540021 LOXL4Q96JB6 756 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 PCNX2A6NKB5 2137 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 A0A1W2PRE2 83 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 ZNF891A8MT65 544 aaPredicted RBP10.62□□□□□ -0.71
MSH6-210ENST00000540021 UPK2O00526 184 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms