RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 BCL2L11O43521 198 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 MYOD1P15172 320 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 FGF7P21781 194 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 ECSCRQ19T08 205 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 MAJINQ3KP22 176 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 KRTAP24-1Q3LI83 254 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 AKIRIN2Q53H80 203 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 UNQ5815/PRO19632Q6UWF5 114 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 MRPL41Q8IXM3 137 aaKnown RBP12.15□□□□□ -0.47
DDB1-216ENST00000539739 LFNGQ8NES3 379 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 OR52E5Q8NH55 327 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 UQCC1Q9NVA1 299 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 FBXO7Q9Y3I1 522 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 RNF114Q9Y508 228 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 TRAV41A0A0B4J266 112 aa12.14□□□□□ -0.47
DDB1-216ENST00000539739 A8MWP6 167 aa12.14□□□□□ -0.47
DDB1-216ENST00000539739 CCSO14618 274 aa12.14□□□□□ -0.47
DDB1-216ENST00000539739 EGR2P11161 476 aaPredicted RBP12.14□□□□□ -0.47
DDB1-216ENST00000539739 SLC35B1P78383 322 aa12.14□□□□□ -0.47
DDB1-216ENST00000539739 IAH1Q2TAA2 248 aaPredicted RBP12.14□□□□□ -0.47
DDB1-216ENST00000539739 CENPVQ7Z7K6 275 aaPredicted RBP12.14□□□□□ -0.47
DDB1-216ENST00000539739 UBAC2Q8NBM4 344 aa12.14□□□□□ -0.47
DDB1-216ENST00000539739 SRSF8Q9BRL6 282 aaKnown RBP12.14□□□□□ -0.47
DDB1-216ENST00000539739 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
DDB1-216ENST00000539739 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
DDB1-216ENST00000539739 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
DDB1-216ENST00000539739 E7EUB6 86 aa12.13□□□□□ -0.47
DDB1-216ENST00000539739 MDKP21741 143 aaPredicted RBP12.13□□□□□ -0.47
DDB1-216ENST00000539739 PRCDQ00LT1 54 aa12.13□□□□□ -0.47
DDB1-216ENST00000539739 C19orf24Q9BVV8 132 aa12.13□□□□□ -0.47
DDB1-216ENST00000539739 ENY2Q9NPA8 101 aa12.13□□□□□ -0.47
DDB1-216ENST00000539739 RNF222A6NCQ9 220 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 FAM90A26D6RGX4 464 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 G3V318 75 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 GOSR2O14653 212 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 PITX3O75364 302 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 BMI1P35226 326 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 PLEKHA3Q9HB20 300 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
DDB1-216ENST00000539739 FXYD6-FXYD2A0A087WZ82 144 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 PSMB11A5LHX3 300 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 M0R143 59 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 HAX1O00165 279 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 TGOLN2O43493 480 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 RD3LP0DJH9 198 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 APELAP0DMC3 54 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 SLC25A4P12235 298 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 ZNF25P17030 456 aaPredicted RBP12.11□□□□□ -0.47
DDB1-216ENST00000539739 DLK1P80370 383 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 OR5M8Q8NGP6 311 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 OR1S2Q8NGQ3 325 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 C2orf50Q96LR7 162 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 WNT10AQ9GZT5 417 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 HSPB7Q9UBY9 170 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 A0A1B0GW64 132 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 NXPH3O95157 252 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 ERHP84090 104 aaKnown RBP12.11□□□□□ -0.47
DDB1-216ENST00000539739 C2orf68Q2NKX9 166 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 PDLIM3Q53GG5 364 aaPredicted RBP12.11□□□□□ -0.47
DDB1-216ENST00000539739 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 KLHDC1Q8N7A1 406 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 OR10W1Q8NGF6 305 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 RNF141Q8WVD5 230 aa12.11□□□□□ -0.47
DDB1-216ENST00000539739 SAT2Q96F10 170 aaPredicted RBP12.11□□□□□ -0.47
DDB1-216ENST00000539739 IGLC7A0M8Q6 106 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 OR13C7P0DN81 318 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 NKX2-1P43699 371 aaPredicted RBP12.1□□□□□ -0.47
DDB1-216ENST00000539739 PROK1P58294 105 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 CYCSP99999 105 aaKnown RBP12.1□□□□□ -0.47
DDB1-216ENST00000539739 SRSF4Q08170 494 aaKnown RBP12.1□□□□□ -0.47
DDB1-216ENST00000539739 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 ZNF329Q86UD4 541 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 COMMD1Q8N668 190 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 TMEM208Q9BTX3 173 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 TREM1Q9NP99 234 aa12.1□□□□□ -0.47
DDB1-216ENST00000539739 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 SCGB1D2O95969 90 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 AREGP15514 252 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 PSMB6P28072 239 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
DDB1-216ENST00000539739 ID3Q02535 119 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 GAMTQ14353 236 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 RHEBQ15382 184 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 C19orf54Q5BKX5 351 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
DDB1-216ENST00000539739 OR5AU1Q8NGC0 362 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 FAM110DQ8TAY7 271 aaPredicted RBP12.09□□□□□ -0.47
DDB1-216ENST00000539739 HIPK2Q9H2X6 1198 aa12.09□□□□□ -0.47
DDB1-216ENST00000539739 RBKSQ9H477 322 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms