RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 FKBP11Q9NYL4 201 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 POLR3KQ9Y2Y1 108 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-210ENST00000539599 PPIAL4AQ9Y536 164 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 ANKHD1Q8IWZ3 2542 aaKnown RBP11.36□□□□□ -0.59
UBE3B-210ENST00000539599 TMEM178BH3BS89 294 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 UBE2L3P68036 154 aaKnown RBP11.36□□□□□ -0.59
UBE3B-210ENST00000539599 CMTM2Q8TAZ6 248 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 CORO2AQ92828 525 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 C11orf52Q96A22 123 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 MS4A10Q96PG2 267 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 COL6A6A6NMZ7 2263 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 AKAP6Q13023 2319 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-210ENST00000539599 IGLV2-8P01709 118 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 CRYABP02511 175 aaKnown RBP11.35□□□□□ -0.59
UBE3B-210ENST00000539599 APOA2P02652 100 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF705DP0CH99 300 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF705BP0CI00 300 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-210ENST00000539599 C2orf83Q53S99 150 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 LEMD1Q68G75 181 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 PATE2Q6UY27 113 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 FAM167A-AS1Q96KT0 104 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 SLC25A33Q9BSK2 321 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 BET1LQ9NYM9 111 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 CELSR1Q9NYQ6 3014 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 AREGP15514 252 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 PRR27Q6MZM9 219 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 GFRALQ6UXV0 394 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF600Q6ZNG1 722 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF355PQ9NSJ1 428 aa11.35□□□□□ -0.59
UBE3B-210ENST00000539599 PRRG2O14669 202 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 TNFRSF1AP19438 455 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 TDGF1P3P51864 188 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 RPEL1Q2QD12 228 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 Q71RC1 249 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-210ENST00000539599 RCHY1Q96PM5 261 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 GAL3ST2Q9H3Q3 398 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 LINC00574Q9H8X3 128 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 TMEM106BQ9NUM4 274 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 A0A1W2PPI3 338 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 LY6HO94772 140 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 MT-CO2P00403 227 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 IGLV2-23P01705 113 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 OR5G3P0C626 314 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 CRISP2P16562 243 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 LOXP28300 417 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-210ENST00000539599 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-210ENST00000539599 PRSS33Q8NF86 280 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
UBE3B-210ENST00000539599 IGKV1D-37A0A075B6S9 117 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 PSMB11A5LHX3 300 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 GCGP01275 180 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 ORM2P19652 201 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 BAGE3Q86Y29 109 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 BAGE2Q86Y30 109 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 OR5B3Q8NH48 314 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 SLC35E1Q96K37 410 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 TBX15Q96SF7 602 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 HSPB9Q9BQS6 159 aa11.33□□□□□ -0.59
UBE3B-210ENST00000539599 CACNA1BQ00975 2339 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 TOX4O94842 621 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 C8orf88P0DMB2 117 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 GRNP28799 593 aaKnown RBP11.33□□□□□ -0.6
UBE3B-210ENST00000539599 MFAP2P55001 183 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 OR1L8Q8NGR8 309 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 DYNLRB1Q9NP97 96 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 NAT8BQ9UHF3 227 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 C9JCJ5 164 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 E7EQL1 145 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 CORTO00230 105 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 NDUFB3O43676 98 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 MRGPRG-AS1Q2M3A8 158 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 TOMM20LQ6UXN7 152 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 ASCL2Q99929 193 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 NCOR1P1Q9H4R4 102 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 GNB4Q9HAV0 340 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 RAB9BQ9NP90 201 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 NAGKQ9UJ70 344 aa11.33□□□□□ -0.6
UBE3B-210ENST00000539599 C22orf46C9J442 243 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 DLL1O00548 723 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 PAX1P15863 534 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 RANP62826 216 aaKnown RBP11.32□□□□□ -0.6
UBE3B-210ENST00000539599 ERHP84090 104 aaKnown RBP11.32□□□□□ -0.6
UBE3B-210ENST00000539599 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-210ENST00000539599 TXNDC17Q9BRA2 123 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 MAP1AP78559 2803 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-210ENST00000539599 SPTBN1Q01082 2364 aaKnown RBP11.32□□□□□ -0.6
UBE3B-210ENST00000539599 MKRN2OSH3BPM6 223 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 COX7A2P2O60397 106 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 IBA57Q5T440 356 aaKnown RBP11.32□□□□□ -0.6
UBE3B-210ENST00000539599 IGF2-ASQ6U949 168 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 RNASE6Q93091 150 aaKnown RBP11.32□□□□□ -0.6
UBE3B-210ENST00000539599 BTF3L4Q96K17 158 aa11.32□□□□□ -0.6
UBE3B-210ENST00000539599 IGF2BP2-AS1Q96M15 143 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms