RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 TGFAP01135 160 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 ZNF324BQ6AW86 544 aaPredicted RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 PLPPR1Q8TBJ4 325 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 ZNF318Q5VUA4 2279 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 MYO7BQ6PIF6 2116 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 RBMY1BA6NDE4 496 aaKnown RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 RBMY1EA6NEQ0 496 aaKnown RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 LYPD3O95274 346 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 TBX6O95947 436 aaPredicted RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 RBMY1DP0C7P1 496 aaKnown RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 RBMY1A1P0DJD3 496 aaKnown RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 RBMY1CP0DJD4 496 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 OTX1P32242 354 aaPredicted RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 ATP5G3P48201 142 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 OR10J3Q5JRS4 329 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 F2Z2F3 143 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 IGHV3-49A0A0A0MS15 119 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 PRCDQ00LT1 54 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 LINC00518Q8N0U6 118 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 LINC01549A6NIU2 74 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 SLC17A3O00476 420 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 HOXA5P20719 270 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 ARL6IP6Q8N6S5 226 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 C8orf46Q8TAG6 207 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 MRPL16Q9NX20 251 aaKnown RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 EPDR1Q9UM22 224 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 DIDO1Q9BTC0 2240 aaKnown RBP5.41□□□□□ -1.54
LSAMP-207ENST00000539563 A8MXK9 166 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 F8VVB4 439 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 F8VWA3 439 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 CNTFRP26992 372 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 TBL2Q9Y4P3 447 aaKnown RBP5.4□□□□□ -1.54
LSAMP-207ENST00000539563 RPL23P62829 140 aaKnown RBP5.4□□□□□ -1.54
LSAMP-207ENST00000539563 ATOH7Q8N100 152 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 C18orf15Q96N68 181 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 PLSCR4Q9NRQ2 329 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.4□□□□□ -1.54
LSAMP-207ENST00000539563 A0A1W2PRE2 83 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 CCL3L1P16619 93 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 TTC9CQ8N5M4 171 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 WFIKKN1Q96NZ8 548 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 ST20Q9HBF5 79 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 MINOS1Q5TGZ0 78 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 MINOS1-NBL1R4GNA1 71 aa5.4□□□□□ -1.54
LSAMP-207ENST00000539563 RNF222A6NCQ9 220 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 WNT2P09544 360 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 DUTP33316 252 aaKnown RBP5.4□□□□□ -1.55
LSAMP-207ENST00000539563 GTSCR1Q86UQ5 136 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 CRIPAKQ8N1N5 446 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 ZNF257Q9Y2Q1 563 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 PPBPP02775 128 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 OR9G9P0C7N8 305 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 DTX2Q86UW9 622 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 RNF125Q96EQ8 232 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 S4R3C0 116 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 THSD7BQ9C0I4 1608 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 PSMB11A5LHX3 300 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 RAMP3O60896 148 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 CD7P09564 240 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 CD59P13987 128 aa5.4□□□□□ -1.55
LSAMP-207ENST00000539563 TRAV8-6A0A0B4J262 113 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 TDGF1P13385 188 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 SRSF1Q07955 248 aaKnown RBP eCLIP5.39□□□□□ -1.55
LSAMP-207ENST00000539563 LINC01559Q495D7 138 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 FOXC2Q99958 501 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 GNB1LQ9BYB4 327 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 NXT2Q9NPJ8 142 aaKnown RBP5.39□□□□□ -1.55
LSAMP-207ENST00000539563 YAE1D1Q9NRH1 226 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 OVOL1O14753 267 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 CD5P06127 495 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 GGNQ86UU5 652 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 SPACA3Q8IXA5 215 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 DMRTA2Q96SC8 542 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 TRGV2A0A075B6R0 118 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 A0A0A6YYD4 124 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV1-46P01743 117 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 RHOGP84095 191 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 METRNQ9UJH8 293 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 CTAG1AP78358 180 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 COQ2Q96H96 371 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 IGKV1D-13A0A0B4J2D9 117 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 IGKV1-9A0A0C4DH69 117 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 OOSP1A8MZH6 123 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 IGKV1-13P0DP09 117 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 FOXA3P55318 350 aaPredicted RBP5.39□□□□□ -1.55
LSAMP-207ENST00000539563 PAX8Q06710 450 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 ZNF362Q5T0B9 420 aaPredicted RBP5.39□□□□□ -1.55
LSAMP-207ENST00000539563 DENND4AQ7Z401 1863 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV3OR16-13A0A075B7E8 117 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV3-74A0A0B4J1X5 117 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 NDUFA3O95167 84 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 MALP21145 153 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 IFI27P40305 119 aaPredicted RBP5.39□□□□□ -1.55
LSAMP-207ENST00000539563 TRGV11A0A075B6L2 103 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 CRYGSP22914 178 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 ATP5L2Q7Z4Y8 100 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 C17orf82Q86X59 251 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms