RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 STPG3Q8N7X2 389 aa16.43■□□□□ 0.22
SCARB1-206ENST00000539320 DYNC2LI1Q8TCX1 351 aa16.43■□□□□ 0.22
SCARB1-206ENST00000539320 RTBDNQ9BSG5 229 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-206ENST00000539320 PUS1Q9Y606 427 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCARB1-206ENST00000539320 CDS2O95674 445 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 OPRK1P41145 380 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 AARDQ4LEZ3 155 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 FAM90A2PQ658T7 463 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 TCF24Q7RTU0 167 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 LHFPL5Q8TAF8 219 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 ST8SIA2Q92186 375 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 RBPMSQ93062 196 aaKnown RBP16.42■□□□□ 0.22
SCARB1-206ENST00000539320 ZFAND3Q9H8U3 227 aa16.42■□□□□ 0.22
SCARB1-206ENST00000539320 A0A0J9YWU9 116 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 TMEM50AO95807 157 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 CD5P06127 495 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 CMC4P56277 68 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-206ENST00000539320 SPCS3P61009 180 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 DHODHQ02127 395 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 Q6ZRM9 215 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 LYG2Q86SG7 212 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 APRG1Q8IVJ8 170 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 GLYATL2Q8WU03 294 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 PRRT1Q99946 306 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 FNDC4Q9H6D8 234 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-206ENST00000539320 VSIRQ9H7M9 311 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 MAP6D1Q9H9H5 199 aa16.41■□□□□ 0.22
SCARB1-206ENST00000539320 HYDINQ4G0P3 5121 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 CRYM-AS1A6NIL9 109 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 SCGB2A1O75556 95 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 TMBIM6P55061 237 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 TNFRSF9Q07011 255 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 GBGT1Q8N5D6 347 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 OR52E5Q8NH55 327 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 RNF183Q96D59 192 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 MRPL36Q9P0J6 103 aaKnown RBP16.4■□□□□ 0.22
SCARB1-206ENST00000539320 CACNG5Q9UF02 275 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 GPR132Q9UNW8 380 aa16.4■□□□□ 0.22
SCARB1-206ENST00000539320 A0A1B0GU03 582 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 NOL3O60936 208 aaKnown RBP16.39■□□□□ 0.21
SCARB1-206ENST00000539320 CLN5O75503 358 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 PAFAH1B2P68402 229 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 ZNF124Q15973 351 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 TMEM268Q5VZI3 342 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 SELENOHQ8IZQ5 122 aaKnown RBP16.39■□□□□ 0.21
SCARB1-206ENST00000539320 OR51S1Q8NGJ8 323 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 OR4X1Q8NH49 305 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 TMEM231Q9H6L2 316 aa16.39■□□□□ 0.21
SCARB1-206ENST00000539320 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-206ENST00000539320 APOHP02749 345 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-206ENST00000539320 PMS2P11Q13670 270 aa16.38■□□□□ 0.21
SCARB1-206ENST00000539320 IGHV3-66A0A0C4DH42 116 aa16.37■□□□□ 0.21
SCARB1-206ENST00000539320 RPS10-NUDT3A0A1W2PQS6 291 aa16.37■□□□□ 0.21
SCARB1-206ENST00000539320 ANKRD20A5PA0PJZ0 165 aa16.37■□□□□ 0.21
SCARB1-206ENST00000539320 CXorf65A6NEN9 183 aa16.37■□□□□ 0.21
SCARB1-206ENST00000539320 CCDC160A6NGH7 325 aa16.37■□□□□ 0.21
SCARB1-206ENST00000539320 GSTZ1O43708 216 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-206ENST00000539320 HTR2BP41595 481 aa16.37■□□□□ 0.21
SCARB1-206ENST00000539320 GPR146Q96CH1 333 aa16.37■□□□□ 0.21
SCARB1-206ENST00000539320 RSL24D1Q9UHA3 163 aaKnown RBP16.37■□□□□ 0.21
SCARB1-206ENST00000539320 TRAV2A0A0B4J234 112 aa16.36■□□□□ 0.21
SCARB1-206ENST00000539320 DFFBO76075 338 aa16.36■□□□□ 0.21
SCARB1-206ENST00000539320 EWSR1Q01844 656 aaKnown RBP eCLIP16.36■□□□□ 0.212e-6■■■■□ 20
SCARB1-206ENST00000539320 LILRB2Q8N423 598 aa16.36■□□□□ 0.21
SCARB1-206ENST00000539320 METTL26Q96S19 204 aa16.36■□□□□ 0.21
SCARB1-206ENST00000539320 SLIRPQ9GZT3 109 aaKnown RBP16.36■□□□□ 0.21
SCARB1-206ENST00000539320 MS4A6AQ9H2W1 248 aa16.36■□□□□ 0.21
SCARB1-206ENST00000539320 HEYLQ9NQ87 328 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-206ENST00000539320 SCP2D1Q9UJQ7 156 aa16.36■□□□□ 0.21
SCARB1-206ENST00000539320 TMEM56-RWDD3S4R434 201 aa16.36■□□□□ 0.21
SCARB1-206ENST00000539320 EPPK1P58107 5090 aaKnown RBP16.35■□□□□ 0.21
SCARB1-206ENST00000539320 CEBPZOSA8MTT3 80 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 MPTX1A8MV57 137 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 H3BMQ9 156 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 DNASE2O00115 360 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-206ENST00000539320 MLANAQ16655 118 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 C2orf83Q53S99 150 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 SLC24A4Q8NFF2 622 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 IL22RA2Q969J5 263 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 CSTL1Q9H114 145 aa16.35■□□□□ 0.21
SCARB1-206ENST00000539320 TRAV30A0A087WSZ9 112 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 A0A1W2PS18 150 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 NUPR2A6NF83 97 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 IGKV1-17P01599 117 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 ATF4P18848 351 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-206ENST00000539320 NPPCP23582 126 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 RPL11P62913 178 aaKnown RBP16.34■□□□□ 0.21
SCARB1-206ENST00000539320 TIGITQ495A1 244 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 TMEM217Q8N7C4 229 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 TMEM230Q96A57 120 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 SCGB3A2Q96PL1 93 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 BIRC6Q9NR09 4857 aa16.34■□□□□ 0.21
SCARB1-206ENST00000539320 SULT1A3P0DMM9 295 aa16.33■□□□□ 0.2
SCARB1-206ENST00000539320 SULT1A4P0DMN0 295 aa16.33■□□□□ 0.2
SCARB1-206ENST00000539320 TMEM187Q14656 261 aa16.33■□□□□ 0.2
SCARB1-206ENST00000539320 OR1S2Q8NGQ3 325 aa16.33■□□□□ 0.2
SCARB1-206ENST00000539320 RNASEH2CQ8TDP1 164 aaKnown RBP16.33■□□□□ 0.2
SCARB1-206ENST00000539320 NARS2Q96I59 477 aaKnown RBP16.33■□□□□ 0.2
SCARB1-206ENST00000539320 MCUBQ9NWR8 336 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms