RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 OR4F4Q96R69 305 aa5.62□□□□□ -1.51
LMO3-220ENST00000539232 RSRP1Q9BUV0 290 aa5.62□□□□□ -1.51
LMO3-220ENST00000539232 SLC5A7Q9GZV3 580 aa5.62□□□□□ -1.51
LMO3-220ENST00000539232 PLEKHA2Q9HB19 425 aa5.62□□□□□ -1.51
LMO3-220ENST00000539232 RAB9BQ9NP90 201 aa5.62□□□□□ -1.51
LMO3-220ENST00000539232 VAX2Q9UIW0 290 aa5.62□□□□□ -1.51
LMO3-220ENST00000539232 CHTOPQ9Y3Y2 248 aaKnown RBP5.62□□□□□ -1.51
LMO3-220ENST00000539232 TET2Q6N021 2002 aaPredicted RBP5.62□□□□□ -1.51
LMO3-220ENST00000539232 TRAV41A0A0B4J266 112 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 A0A1W2PN81 502 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 WI2-2373I1.2A0A1W2PRP0 233 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 C5orf51A6NDU8 294 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 TUSC2O75896 110 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 YIF1AO95070 293 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 GSTP1P09211 210 aaKnown RBP5.61□□□□□ -1.51
LMO3-220ENST00000539232 APELAP0DMC3 54 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 MYOD1P15172 320 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 AADACP22760 399 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 DTYMKP23919 212 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 CHRNA7P36544 502 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 ECI1P42126 302 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 ERVFC1-1P60608 527 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 RPS16P62249 146 aaKnown RBP5.61□□□□□ -1.51
LMO3-220ENST00000539232 CD69Q07108 199 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 PNRC1Q12796 327 aaPredicted RBP5.61□□□□□ -1.51
LMO3-220ENST00000539232 FOXE3Q13461 319 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 KIR2DS1Q14954 304 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 ECSCRQ19T08 205 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 TMEM241Q24JQ0 296 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 KHDC3LQ587J8 217 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 TMEM128Q5BJH2 165 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 SOHLH1Q5JUK2 328 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 C10orf55Q5SWW7 151 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 GGNBP1Q5YKI7 109 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 FAM71F2Q6NXP2 309 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 FAAP20Q6NZ36 180 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 Q6ZRG5 221 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 C19orf35Q6ZS72 473 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 ZNF695Q8IW36 515 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 FOXRED2Q8IWF2 684 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 TMEM183AQ8IXX5 376 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 VKORC1L1Q8N0U8 176 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 SECTM1Q8WVN6 248 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 BSCL2Q96G97 398 aaPredicted RBP5.61□□□□□ -1.51
LMO3-220ENST00000539232 ACY3Q96HD9 319 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 C2orf50Q96LR7 162 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 PACRGQ96M98 296 aaPredicted RBP5.61□□□□□ -1.51
LMO3-220ENST00000539232 MS4A10Q96PG2 267 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 RNF126Q9BV68 326 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 TMEM231Q9H6L2 316 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 SLC35D1Q9NTN3 355 aa5.61□□□□□ -1.51
LMO3-220ENST00000539232 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 TMEM238LA0A1B0GVL6 79 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 K7EIL1 84 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 CCL24O00175 119 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BKO60814 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 CA2P00918 260 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 PF4P02776 101 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BJP06899 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 CD33P20138 364 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BOP23527 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 DUTP33316 252 aaKnown RBP5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BBP33778 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 RND2P52198 227 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BDP58876 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BCP62807 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 RANP62826 216 aaKnown RBP5.6□□□□□ -1.51
LMO3-220ENST00000539232 PPP1R1AQ13522 171 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 SRSF7Q16629 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST2H2BEQ16778 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 ZNF674Q2M3X9 581 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 AARDQ4LEZ3 155 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 CXorf66Q5JRM2 361 aaPredicted RBP5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.6□□□□□ -1.51
LMO3-220ENST00000539232 TEX38Q6PEX7 206 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 PPP1R27Q86WC6 154 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HOGA1Q86XE5 327 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 ZNF491Q8N8L2 437 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 DTD1Q8TEA8 209 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BHQ93079 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 BTF3L4Q96K17 158 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BNQ99877 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BMQ99879 126 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 SCRT1Q9BWW7 348 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 CTDSP1Q9GZU7 261 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 CCL28Q9NRJ3 127 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 ANXA10Q9UJ72 324 aa5.6□□□□□ -1.51
LMO3-220ENST00000539232 DNAH9Q9NYC9 4486 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 TRBV24-1A0A075B6N3 115 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 E7EUB6 86 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 TNFSF12O43508 249 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 RAMP3O60896 148 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 SFT2D2O95562 160 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 IGHV3-11P01762 117 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 PMP2P02689 132 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 HSPB1P04792 205 aaKnown RBP5.59□□□□□ -1.51
LMO3-220ENST00000539232 ELANEP08246 267 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 RD3LP0DJH9 198 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms