RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 FAM25GB3EWG6 89 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 CLN5O75503 358 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 ETV6P41212 452 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 SUB1P53999 127 aaKnown RBP eCLIP9.13□□□□□ -0.95
VAMP1-206ENST00000538970 RPL11P62913 178 aaKnown RBP9.13□□□□□ -0.95
VAMP1-206ENST00000538970 TMEM187Q14656 261 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 BSXQ3C1V8 233 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 OR4D10Q8NGI6 311 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 OR52I2Q8NH67 350 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 TMEM231Q9H6L2 316 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 MTFP1Q9UDX5 166 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 FBXL17Q9UF56 701 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 ABCA13Q86UQ4 5058 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 DEFB4AO15263 64 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 IFNA4P05014 189 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 NPPCP23582 126 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 UCP1P25874 307 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 OPRK1P41145 380 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 SP6Q3SY56 376 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 CCDC71LQ8N9Z2 235 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 OR13C8Q8NGS7 320 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 OR4X1Q8NH49 305 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 AP3S1Q92572 193 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 COPZ2Q9P299 210 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 EXTL2Q9UBQ6 330 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 RABAC1Q9UI14 185 aa9.12□□□□□ -0.95
VAMP1-206ENST00000538970 A0A1W2PS18 150 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 K7EQG2 157 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 SCGB2A1O75556 95 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 GABARAPO95166 117 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 CD74P04233 296 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 CRYBB3P26998 211 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 RPL5P46777 297 aaKnown RBP9.11□□□□□ -0.95
VAMP1-206ENST00000538970 P2RY1P47900 373 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 AARDQ4LEZ3 155 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 Q6ZRM9 215 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 TRPT1Q86TN4 253 aaKnown RBP9.11□□□□□ -0.95
VAMP1-206ENST00000538970 STHQ8IWL8 128 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 Q8NAQ8 132 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 STXBP6Q8NFX7 210 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 TERB2Q8NHR7 220 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 ZFAND1Q8TCF1 268 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 RRNAD1Q96FB5 475 aaKnown RBP9.11□□□□□ -0.95
VAMP1-206ENST00000538970 GRAMD2BQ96HH9 432 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 METTL26Q96S19 204 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 ABHD1Q96SE0 405 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 NAA50Q9GZZ1 169 aaKnown RBP9.11□□□□□ -0.95
VAMP1-206ENST00000538970 ENY2Q9NPA8 101 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 VPS13DQ5THJ4 4388 aa9.11□□□□□ -0.95
VAMP1-206ENST00000538970 B3GALNT1O75752 331 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 IGKV1-17P01599 117 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 GIG44P09565 113 aaPredicted RBP9.1□□□□□ -0.95
VAMP1-206ENST00000538970 ZNF182P17025 639 aaPredicted RBP9.1□□□□□ -0.95
VAMP1-206ENST00000538970 C4BPBP20851 252 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 TAS2R19P59542 299 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 CTF1Q16619 201 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 MLANAQ16655 118 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 TIGITQ495A1 244 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 SCGB2B2Q4G0G5 96 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 TMEM41BQ5BJD5 291 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 FAM219AQ8IW50 185 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 TMEM229BQ8NBD8 167 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 RNASE11Q8TAA1 199 aaKnown RBP9.1□□□□□ -0.95
VAMP1-206ENST00000538970 MARCH1Q8TCQ1 289 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 C2CD4CQ8TF44 421 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
VAMP1-206ENST00000538970 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 CDS2O95674 445 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 RAB3DO95716 219 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 OR5AC1P0C628 307 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 ZNF688P0C7X2 276 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 SPP1P10451 314 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 TCTAP57738 103 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 SPCS3P61009 180 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 PRR20EP86478 221 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 PRR20CP86479 221 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 PRR20DP86480 221 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 PRR20BP86481 221 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 PRR20AP86496 221 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 STEAP1BQ6NZ63 245 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
VAMP1-206ENST00000538970 OR52E5Q8NH55 327 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 LHFPL5Q8TAF8 219 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 C15orf40Q8WUR7 153 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 TMEM230Q96A57 120 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 NARS2Q96I59 477 aaKnown RBP9.09□□□□□ -0.95
VAMP1-206ENST00000538970 TMEM222Q9H0R3 208 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 HRH4Q9H3N8 390 aa9.09□□□□□ -0.95
VAMP1-206ENST00000538970 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 RPS10-NUDT3A0A1W2PQS6 291 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 KNCNA6PVL3 124 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 ZNF705EA8MWA4 302 aaPredicted RBP9.08□□□□□ -0.96
VAMP1-206ENST00000538970 C11orf94C9JXX5 98 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 IGLC1P0CG04 106 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 RBMY1A1P0DJD3 496 aaKnown RBP9.08□□□□□ -0.96
VAMP1-206ENST00000538970 RBMY1CP0DJD4 496 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 MIFP14174 115 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 HTR2BP41595 481 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms